RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APQ12	YIL040W	CTA1	P15202	515 aa		0.38	□□□□□ -2.35
APQ12	YIL040W	ROX1	P25042	368 aa		0.38	□□□□□ -2.35
APQ12	YIL040W	RPL16A	P26784	199 aa	Known RBP	0.38	□□□□□ -2.35
APQ12	YIL040W	EFM1	P38732	585 aa		0.38	□□□□□ -2.35
APQ12	YIL040W	YCH1	P42937	148 aa		0.38	□□□□□ -2.35
APQ12	YIL040W	PRP42	Q03776	544 aa	Known RBP	0.38	□□□□□ -2.35
APQ12	YIL040W	YMR130W	Q04223	302 aa		0.38	□□□□□ -2.35
APQ12	YIL040W	ARR1	Q06596	294 aa		0.38	□□□□□ -2.35
APQ12	YIL040W	MMT2	Q08970	484 aa		0.38	□□□□□ -2.35
APQ12	YIL040W	YDL109C	Q12103	647 aa		0.38	□□□□□ -2.35
APQ12	YIL040W	SGT2	Q12118	346 aa	Known RBP	0.38	□□□□□ -2.35
APQ12	YIL040W	TPK3	P05986	398 aa		0.37	□□□□□ -2.35
APQ12	YIL040W	BGL2	P15703	313 aa	Known RBP	0.37	□□□□□ -2.35
APQ12	YIL040W	TRX2	P22803	104 aa	Known RBP	0.37	□□□□□ -2.35
APQ12	YIL040W	MIR1	P23641	311 aa	Known RBP	0.37	□□□□□ -2.35
APQ12	YIL040W	INO2	P26798	304 aa		0.37	□□□□□ -2.35
APQ12	YIL040W	ASP1	P38986	381 aa	Predicted RBP	0.37	□□□□□ -2.35
APQ12	YIL040W	SEC27	P41811	889 aa	Known RBP	0.37	□□□□□ -2.35
APQ12	YIL040W	CAK1	P43568	368 aa	Predicted RBP	0.37	□□□□□ -2.35
APQ12	YIL040W	ASG7	P46993	209 aa		0.37	□□□□□ -2.35
APQ12	YIL040W	AIM23	P47015	356 aa		0.37	□□□□□ -2.35
APQ12	YIL040W	PIB2	P53191	635 aa		0.37	□□□□□ -2.35
APQ12	YIL040W	YNL095C	P53932	642 aa		0.37	□□□□□ -2.35
APQ12	YIL040W	TIM10	P87108	93 aa		0.37	□□□□□ -2.35
APQ12	YIL040W	PRP3	Q03338	469 aa	Predicted RBP	0.37	□□□□□ -2.35
APQ12	YIL040W	UTP15	Q04305	513 aa	Known RBP	0.37	□□□□□ -2.35
APQ12	YIL040W	DIB1	Q06819	143 aa	Predicted RBP	0.37	□□□□□ -2.35
APQ12	YIL040W	FEX1	Q08913	375 aa		0.37	□□□□□ -2.35
APQ12	YIL040W	FEX2	Q08991	375 aa		0.37	□□□□□ -2.35
APQ12	YIL040W	CDC21	P06785	304 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	RPL23A	P0CX41	137 aa	Known RBP	0.36	□□□□□ -2.35
APQ12	YIL040W	RPL23B	P0CX42	137 aa	Known RBP	0.36	□□□□□ -2.35
APQ12	YIL040W	CLB3	P24870	427 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	SSE1	P32589	693 aa	Known RBP	0.36	□□□□□ -2.35
APQ12	YIL040W	YEL043W	P32618	956 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	OLA1	P38219	394 aa	Known RBP	0.36	□□□□□ -2.35
APQ12	YIL040W	INM1	P38710	295 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	ATM1	P40416	690 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	ABM1	P47146	123 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	TOM22	P49334	152 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	TOS2	P50078	622 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	DON1	Q05610	365 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	GAS2	Q06135	555 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	YDR018C	Q12185	396 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	MTR10	Q99189	972 aa		0.36	□□□□□ -2.35
APQ12	YIL040W	ARF1	P11076	181 aa	Known RBP	0.35	□□□□□ -2.35
APQ12	YIL040W	HSP104	P31539	908 aa	Known RBP	0.35	□□□□□ -2.35
APQ12	YIL040W	IMP2'	P32351	346 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	TOA2	P32774	122 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	SAS3	P34218	831 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	DOA1	P36037	715 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	YKR015C	P36111	568 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	RCK1	P38622	512 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	STN1	P38960	494 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	POP2	P39008	433 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	CGI121	Q03705	181 aa	Known RBP	0.35	□□□□□ -2.35
APQ12	YIL040W	ACL4	Q03771	387 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	DXO1	Q06349	442 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	YPL264C	Q08980	353 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	TFC7	Q12415	435 aa		0.35	□□□□□ -2.35
APQ12	YIL040W	DFM1	Q12743	341 aa	Known RBP	0.35	□□□□□ -2.35
APQ12	YIL040W	TFS1	P14306	219 aa		0.34	□□□□□ -2.36
APQ12	YIL040W	SLM5	P25345	492 aa	Known RBP	0.34	□□□□□ -2.36
APQ12	YIL040W	PMT2	P31382	759 aa		0.34	□□□□□ -2.36
APQ12	YIL040W	CLB6	P32943	380 aa		0.34	□□□□□ -2.36
APQ12	YIL040W	ASC1	P38011	319 aa	Known RBP	0.34	□□□□□ -2.36
APQ12	YIL040W	NRG2	P38082	220 aa		0.34	□□□□□ -2.36
APQ12	YIL040W	YER084W	P40057	128 aa		0.34	□□□□□ -2.36
APQ12	YIL040W	ECO1	P43605	281 aa		0.34	□□□□□ -2.36
APQ12	YIL040W	EFM3	P47163	339 aa		0.34	□□□□□ -2.36
APQ12	YIL040W	MYO5	Q04439	1219 aa	Known RBP	0.34	□□□□□ -2.36
APQ12	YIL040W	ECM19	Q06011	112 aa		0.34	□□□□□ -2.36
APQ12	YIL040W	MMR1	Q06324	491 aa		0.34	□□□□□ -2.36
APQ12	YIL040W	MRX4	Q12467	430 aa		0.34	□□□□□ -2.36
APQ12	YIL040W	MET17	P06106	444 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	RPL12A	P0CX53	165 aa	Known RBP	0.33	□□□□□ -2.36
APQ12	YIL040W	RPL12B	P0CX54	165 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	PHO80	P20052	293 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	RPB9	P27999	122 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	ITR2	P30606	609 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	BYE1	P36106	594 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	IST2	P38250	946 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	CTM1	P38818	585 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	YIL054W	P40524	105 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	MIC19	P43594	170 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	YFR045W	P43617	309 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	YFR054C	P43622	192 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	RPT4	P53549	437 aa	Known RBP	0.33	□□□□□ -2.36
APQ12	YIL040W	ARX1	Q03862	593 aa	Known RBP	0.33	□□□□□ -2.36
APQ12	YIL040W	RNH203	Q12338	110 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	YOL159C-A	Q3E769	90 aa		0.33	□□□□□ -2.36
APQ12	YIL040W	CKA1	P15790	372 aa		0.32	□□□□□ -2.36
APQ12	YIL040W	ARO4	P32449	370 aa	Known RBP	0.32	□□□□□ -2.36
APQ12	YIL040W	TAE1	P38340	232 aa		0.32	□□□□□ -2.36
APQ12	YIL040W	RRG9	P40156	214 aa		0.32	□□□□□ -2.36
APQ12	YIL040W	IRC6	P43615	237 aa		0.32	□□□□□ -2.36
APQ12	YIL040W	PMT5	P52867	743 aa		0.32	□□□□□ -2.36
APQ12	YIL040W	SYF2	P53277	215 aa	Predicted RBP	0.32	□□□□□ -2.36
APQ12	YIL040W	ERO1	Q03103	563 aa		0.32	□□□□□ -2.36
APQ12	YIL040W	NSE1	Q07913	336 aa		0.32	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms