RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W TDH3P00359 332 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
HMRA1YCR097W GFD2P25370 566 aaKnown RBP1.15□□□□□ -2.23
HMRA1YCR097W IMP2'P32351 346 aa1.15□□□□□ -2.23
HMRA1YCR097W TPK3P05986 398 aa1.14□□□□□ -2.23
HMRA1YCR097W CDC21P06785 304 aa1.14□□□□□ -2.23
HMRA1YCR097W ADH3P07246 375 aaKnown RBP1.14□□□□□ -2.23
HMRA1YCR097W CLB3P24870 427 aa1.14□□□□□ -2.23
HMRA1YCR097W RPL16AP26784 199 aaKnown RBP1.14□□□□□ -2.23
HMRA1YCR097W ERG3P32353 365 aa1.14□□□□□ -2.23
HMRA1YCR097W BUD13P46947 266 aaPredicted RBP1.14□□□□□ -2.23
HMRA1YCR097W ACL4Q03771 387 aa1.14□□□□□ -2.23
HMRA1YCR097W GAS2Q06135 555 aa1.14□□□□□ -2.23
HMRA1YCR097W YDL109CQ12103 647 aa1.14□□□□□ -2.23
HMRA1YCR097W ARO3P14843 370 aaKnown RBP1.13□□□□□ -2.23
HMRA1YCR097W KRE1P17260 313 aa1.13□□□□□ -2.23
HMRA1YCR097W DAL81P21657 970 aa1.13□□□□□ -2.23
HMRA1YCR097W ASC1P38011 319 aaKnown RBP1.13□□□□□ -2.23
HMRA1YCR097W INM1P38710 295 aa1.13□□□□□ -2.23
HMRA1YCR097W YPR063CQ12160 140 aa1.13□□□□□ -2.23
HMRA1YCR097W MTR10Q99189 972 aa1.13□□□□□ -2.23
HMRA1YCR097W TOA2P32774 122 aa1.12□□□□□ -2.23
HMRA1YCR097W STN1P38960 494 aa1.12□□□□□ -2.23
HMRA1YCR097W SEC27P41811 889 aaKnown RBP1.12□□□□□ -2.23
HMRA1YCR097W ASG7P46993 209 aa1.12□□□□□ -2.23
HMRA1YCR097W AIM23P47015 356 aa1.12□□□□□ -2.23
HMRA1YCR097W RPT4P53549 437 aaKnown RBP1.12□□□□□ -2.23
HMRA1YCR097W MED2Q12124 431 aa1.12□□□□□ -2.23
HMRA1YCR097W RPL23AP0CX41 137 aaKnown RBP1.11□□□□□ -2.23
HMRA1YCR097W RPL23BP0CX42 137 aaKnown RBP1.11□□□□□ -2.23
HMRA1YCR097W OLA1P38219 394 aaKnown RBP1.11□□□□□ -2.23
HMRA1YCR097W TOM22P49334 152 aa1.11□□□□□ -2.23
HMRA1YCR097W MIR1P23641 311 aaKnown RBP1.1□□□□□ -2.23
HMRA1YCR097W PMT2P31382 759 aa1.1□□□□□ -2.23
HMRA1YCR097W ARR1Q06596 294 aa1.1□□□□□ -2.23
HMRA1YCR097W BGL2P15703 313 aaKnown RBP1.09□□□□□ -2.23
HMRA1YCR097W RSA4P25382 515 aaKnown RBP1.09□□□□□ -2.23
HMRA1YCR097W HSP104P31539 908 aaKnown RBP1.09□□□□□ -2.23
HMRA1YCR097W SSE1P32589 693 aaKnown RBP1.09□□□□□ -2.23
HMRA1YCR097W DOA1P36037 715 aa1.09□□□□□ -2.23
HMRA1YCR097W PRP3Q03338 469 aaPredicted RBP1.09□□□□□ -2.23
HMRA1YCR097W UTP15Q04305 513 aaKnown RBP1.09□□□□□ -2.23
HMRA1YCR097W YDR114CQ04597 100 aa1.09□□□□□ -2.23
HMRA1YCR097W YDR222WQ04925 415 aa1.09□□□□□ -2.23
HMRA1YCR097W PEX30Q06169 523 aa1.09□□□□□ -2.23
HMRA1YCR097W RNH203Q12338 110 aa1.09□□□□□ -2.23
HMRA1YCR097W OPI3P05375 206 aa1.08□□□□□ -2.24
HMRA1YCR097W ARF1P11076 181 aaKnown RBP1.08□□□□□ -2.24
HMRA1YCR097W IRC6P43615 237 aa1.08□□□□□ -2.24
HMRA1YCR097W ISN1Q99312 450 aa1.08□□□□□ -2.24
HMRA1YCR097W SLM5P25345 492 aaKnown RBP1.07□□□□□ -2.24
HMRA1YCR097W MMR1Q06324 491 aa1.07□□□□□ -2.24
HMRA1YCR097W MMT2Q08970 484 aa1.07□□□□□ -2.24
HMRA1YCR097W YDR018CQ12185 396 aa1.07□□□□□ -2.24
HMRA1YCR097W RPL12AP0CX53 165 aaKnown RBP1.06□□□□□ -2.24
HMRA1YCR097W RPL12BP0CX54 165 aa1.06□□□□□ -2.24
HMRA1YCR097W ASP1P38986 381 aaPredicted RBP1.06□□□□□ -2.24
HMRA1YCR097W YCH1P42937 148 aa1.06□□□□□ -2.24
HMRA1YCR097W PMT5P52867 743 aa1.06□□□□□ -2.24
HMRA1YCR097W CSI1Q04368 295 aa1.06□□□□□ -2.24
HMRA1YCR097W DXO1Q06349 442 aa1.06□□□□□ -2.24
HMRA1YCR097W CTA1P15202 515 aa1.05□□□□□ -2.24
HMRA1YCR097W RPB9P27999 122 aa1.05□□□□□ -2.24
HMRA1YCR097W ECM19Q06011 112 aa1.05□□□□□ -2.24
HMRA1YCR097W YOR283WQ12040 230 aaKnown RBP1.05□□□□□ -2.24
HMRA1YCR097W VPS54Q12071 889 aa1.05□□□□□ -2.24
HMRA1YCR097W ROY1Q04847 553 aa1.04□□□□□ -2.24
HMRA1YCR097W DIB1Q06819 143 aaPredicted RBP1.04□□□□□ -2.24
HMRA1YCR097W YPL264CQ08980 353 aa1.04□□□□□ -2.24
HMRA1YCR097W SGT2Q12118 346 aaKnown RBP1.04□□□□□ -2.24
HMRA1YCR097W RPS14AP06367 137 aaKnown RBP1.03□□□□□ -2.24
HMRA1YCR097W REC107P21651 314 aa1.03□□□□□ -2.24
HMRA1YCR097W TAE1P38340 232 aa1.03□□□□□ -2.24
HMRA1YCR097W RPS14BP39516 138 aaKnown RBP1.03□□□□□ -2.24
HMRA1YCR097W YER084WP40057 128 aa1.03□□□□□ -2.24
HMRA1YCR097W NSE1Q07913 336 aa1.03□□□□□ -2.24
HMRA1YCR097W MED1Q12321 566 aa1.03□□□□□ -2.24
HMRA1YCR097W MRP7P12687 371 aa1.02□□□□□ -2.25
HMRA1YCR097W EFM1P38732 585 aa1.02□□□□□ -2.25
HMRA1YCR097W EFM3P47163 339 aa1.02□□□□□ -2.25
HMRA1YCR097W GAT3Q07928 141 aa1.02□□□□□ -2.25
HMRA1YCR097W YCR051WP25631 222 aa1.01□□□□□ -2.25
HMRA1YCR097W INO2P26798 304 aa1.01□□□□□ -2.25
HMRA1YCR097W RIM1P32445 135 aaKnown RBP1.01□□□□□ -2.25
HMRA1YCR097W MED8P38304 223 aa1.01□□□□□ -2.25
HMRA1YCR097W YFR045WP43617 309 aa1.01□□□□□ -2.25
HMRA1YCR097W ERO1Q03103 563 aa1.01□□□□□ -2.25
HMRA1YCR097W SCS7Q03529 384 aa1.01□□□□□ -2.25
HMRA1YCR097W URC2Q04411 772 aa1.01□□□□□ -2.25
HMRA1YCR097W YDR341CQ05506 607 aaKnown RBP1.01□□□□□ -2.25
HMRA1YCR097W FEX1Q08913 375 aa1.01□□□□□ -2.25
HMRA1YCR097W FEX2Q08991 375 aa1.01□□□□□ -2.25
HMRA1YCR097W DFM1Q12743 341 aaKnown RBP1.01□□□□□ -2.25
HMRA1YCR097W YRF1-4O13559 1382 aa1□□□□□ -2.25
HMRA1YCR097W RCK1P38622 512 aa1□□□□□ -2.25
HMRA1YCR097W ARO4P32449 370 aaKnown RBP0.99□□□□□ -2.25
HMRA1YCR097W YEL043WP32618 956 aa0.99□□□□□ -2.25
HMRA1YCR097W BYE1P36106 594 aa0.99□□□□□ -2.25
HMRA1YCR097W ZTA1P38230 334 aaKnown RBP0.99□□□□□ -2.25
HMRA1YCR097W SLM4P38247 162 aa0.99□□□□□ -2.25
HMRA1YCR097W MRPL19P53875 158 aa0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms