RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 RPS6P62753 249 aaKnown RBP18.58■□□□□ 0.56
PHGDH-229ENST00000641891 PCNX4Q63HM2 1172 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 PADI6Q6TGC4 694 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 GBP6Q6ZN66 633 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 ZNF571Q7Z3V5 609 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-229ENST00000641891 NOX5Q96PH1 765 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 OSBPL9Q96SU4 736 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 AGPAT3Q9NRZ7 376 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 SEL1LQ9UBV2 794 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 PPP1R9AQ9ULJ8 1098 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 SAMM50Q9Y512 469 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 TMEM150BA6NC51 233 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 POLR3GO15318 223 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-229ENST00000641891 ERLIN1O75477 346 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 PSMC2P35998 433 aaKnown RBP18.57■□□□□ 0.56
PHGDH-229ENST00000641891 MTMR1Q13613 665 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 SMC1AQ14683 1233 aaKnown RBP18.57■□□□□ 0.56
PHGDH-229ENST00000641891 TERF2Q15554 542 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 PRAMEF18Q5VWM3 479 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 L1RE1Q9UN81 338 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 ZHX2Q9Y6X8 837 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 MYH11P35749 1972 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 ZMYND10O75800 440 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 MYCLP12524 364 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-229ENST00000641891 OAS2P29728 719 aaKnown RBP18.57■□□□□ 0.56
PHGDH-229ENST00000641891 GHRHRQ02643 423 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 WDR93Q6P2C0 686 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 TRMT1LQ7Z2T5 733 aaKnown RBP18.57■□□□□ 0.56
PHGDH-229ENST00000641891 TLR10Q9BXR5 811 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 ZMYND15Q9H091 742 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 KCND2Q9NZV8 630 aa18.57■□□□□ 0.56
PHGDH-229ENST00000641891 UTRNP46939 3433 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 P4HBP07237 508 aaKnown RBP18.56■□□□□ 0.56
PHGDH-229ENST00000641891 PGM5Q15124 567 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 NFIL3Q16649 462 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 UGCGQ16739 394 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 KIAA0753Q2KHM9 967 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 IQCEQ6IPM2 695 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 NIPA1Q7RTP0 329 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 NEK9Q8TD19 979 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 ZCCHC17Q9NP64 241 aaKnown RBP18.56■□□□□ 0.56
PHGDH-229ENST00000641891 CNOT7Q9UIV1 285 aaKnown RBP18.56■□□□□ 0.56
PHGDH-229ENST00000641891 BCS1LQ9Y276 419 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 HYOU1Q9Y4L1 999 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 UBE4BO95155 1302 aa18.56■□□□□ 0.56
PHGDH-229ENST00000641891 PALMO75781 387 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 TRIM49P0CI25 452 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 TRIM49CP0CI26 452 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 RPS12P25398 132 aaKnown RBP18.55■□□□□ 0.56
PHGDH-229ENST00000641891 JAM2P57087 298 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 NAB2Q15742 525 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 RNF10Q8N5U6 811 aaKnown RBP18.55■□□□□ 0.56
PHGDH-229ENST00000641891 ZKSCAN4Q969J2 545 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-229ENST00000641891 ATG4CQ96DT6 458 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 RPGRIP1Q96KN7 1286 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 TRERF1Q96PN7 1200 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 GBP3Q9H0R5 595 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 DMAC2Q9NW81 257 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 RIPK3Q9Y572 518 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 TISP43B9A030 160 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 H3BQF6 201 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 K7ENM7 598 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 ATP9AO75110 1047 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 PPP1R37O75864 691 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 FTCDO95954 541 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 NSMFQ6X4W1 530 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 HS2ST1Q7LGA3 356 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 HDXQ7Z353 690 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 TXLNBQ8N3L3 684 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 HINFPQ9BQA5 517 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 STRA6Q9BX79 667 aa18.55■□□□□ 0.56
PHGDH-229ENST00000641891 CTDP1Q9Y5B0 961 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-229ENST00000641891 PRLRP16471 622 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 RARRES1P49788 294 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 DNA2P51530 1060 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 CBWD6Q4V339 395 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 CBWD3Q5JTY5 395 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 CBWD5Q5RIA9 395 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 UTP14CQ5TAP6 766 aaKnown RBP18.54■□□□□ 0.56
PHGDH-229ENST00000641891 STXBP4Q6ZWJ1 553 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 SYCP3Q8IZU3 236 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 RDH13Q8NBN7 331 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 LOXHD1Q8IVV2 1947 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 VWA5AO00534 786 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 FMO5P49326 533 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 MRPS25P82663 173 aaKnown RBP18.54■□□□□ 0.56
PHGDH-229ENST00000641891 DOCK1Q14185 1865 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 GSPT2Q8IYD1 628 aaKnown RBP18.54■□□□□ 0.56
PHGDH-229ENST00000641891 RMDN3Q96TC7 470 aa18.54■□□□□ 0.56
PHGDH-229ENST00000641891 LUC7LQ9NQ29 371 aaKnown RBP18.54■□□□□ 0.56
PHGDH-229ENST00000641891 PARP14Q460N5 1801 aa18.53■□□□□ 0.56
PHGDH-229ENST00000641891 GTPBP10A4D1E9 387 aaKnown RBP18.53■□□□□ 0.56
PHGDH-229ENST00000641891 ZBED4O75132 1171 aa18.53■□□□□ 0.56
PHGDH-229ENST00000641891 TCP1P17987 556 aaKnown RBP18.53■□□□□ 0.56
PHGDH-229ENST00000641891 MATR3P43243 847 aaKnown RBP eCLIP18.53■□□□□ 0.56
PHGDH-229ENST00000641891 QARSP47897 775 aaKnown RBP18.53■□□□□ 0.56
PHGDH-229ENST00000641891 RNF207Q6ZRF8 634 aa18.53■□□□□ 0.56
PHGDH-229ENST00000641891 MS4A14Q96JA4 679 aa18.53■□□□□ 0.56
PHGDH-229ENST00000641891 PDCD2LQ9BRP1 358 aa18.53■□□□□ 0.56
PHGDH-229ENST00000641891 MKNK1Q9BUB5 465 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms