RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 SECISBP2LQ93073 1101 aaKnown RBP9.01□□□□□ -0.97
PHGDH-217ENST00000641455 MTMR8Q96EF0 704 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 TMEM169Q96HH4 297 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 BAHCC1Q9P281 2608 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 ZBTB47Q9UFB7 747 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-217ENST00000641455 RALYQ9UKM9 306 aaKnown RBP9.01□□□□□ -0.97
PHGDH-217ENST00000641455 USP18Q9UMW8 372 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 ST3GAL5Q9UNP4 418 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 KDM3AQ9Y4C1 1321 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 FANCMQ8IYD8 2048 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 SMIM35A0A1B0GVV1 85 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 KRBA1A5PL33 1030 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 NT5C1B-RDH14C9J2C7 533 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 KCNA2P16389 499 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 KCNA4P22459 653 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 GBP2P32456 591 aaPredicted RBP9□□□□□ -0.97
PHGDH-217ENST00000641455 LMNB2Q03252 620 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 COL9A2Q14055 689 aaPredicted RBP9□□□□□ -0.97
PHGDH-217ENST00000641455 VARS2Q5ST30 1063 aaKnown RBP9□□□□□ -0.97
PHGDH-217ENST00000641455 MTHFD1LQ6UB35 978 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 LRRC55Q6ZSA7 311 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 C1orf210Q8IVY1 113 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 SLC39A11Q8N1S5 342 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 NME8Q8N427 588 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 SUMF1Q8NBK3 374 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 FEZF2Q8TBJ5 459 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 GPRASP2Q96D09 838 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 CDHR1Q96JP9 859 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 SFXN1Q9H9B4 322 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 IGSF9Q9P2J2 1179 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 WNT16Q9UBV4 365 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 MAD2L2Q9UI95 211 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 SIT1Q9Y3P8 196 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 GPR179Q6PRD1 2367 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 DNAH14Q0VDD8 3507 aa9□□□□□ -0.97
PHGDH-217ENST00000641455 WDR87Q6ZQQ6 2873 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 LAMA4Q16363 1823 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 PNMA6FA0A0J9YX94 578 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 PRR5-ARHGAP8B1AHC4 643 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 ALDH7A1P49419 539 aaKnown RBP8.99□□□□□ -0.97
PHGDH-217ENST00000641455 NT5C2P49902 561 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 MFAP1P55081 439 aaKnown RBP8.99□□□□□ -0.97
PHGDH-217ENST00000641455 ARHGAP8P85298 464 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 MTMR1Q13613 665 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 USP17L6PQ6QN14 398 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 GPR149Q86SP6 731 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 VPS52Q8N1B4 723 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 GPR161Q8N6U8 529 aaKnown RBP8.99□□□□□ -0.97
PHGDH-217ENST00000641455 TMEM40Q8WWA1 233 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 RSAD2Q8WXG1 361 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 CASD1Q96PB1 797 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 OSMRQ99650 979 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 RTKNQ9BST9 563 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 ELAC1Q9H777 363 aaKnown RBP8.99□□□□□ -0.97
PHGDH-217ENST00000641455 CDHR5Q9HBB8 845 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 JPH1Q9HDC5 661 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-217ENST00000641455 ZSWIM5Q9P217 1185 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 CACNA1IQ9P0X4 2223 aa8.99□□□□□ -0.97
PHGDH-217ENST00000641455 PALM3A6NDB9 673 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-217ENST00000641455 ADRB1P08588 477 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 SRFP11831 508 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 ZSCAN20P17040 1043 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-217ENST00000641455 KLRC1P26715 233 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 STAT5BP51692 787 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 BCAR1P56945 870 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 DMWDQ09019 674 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 KIZQ2M2Z5 673 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 SLC35G1Q2M3R5 365 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 LETM2Q2VYF4 491 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 FAM43BQ6ZT52 329 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-217ENST00000641455 FAM228AQ86W67 206 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 PPFIBP1Q86W92 1011 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 HELQQ8TDG4 1101 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 GPR152Q8TDT2 470 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 SLC22A17Q8WUG5 538 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 ATRIPQ8WXE1 791 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 PCYT2Q99447 389 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 KRT23Q9C075 422 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 ZBP1Q9H171 429 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 ARHGEF3Q9NR81 526 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 RNF19AQ9NV58 838 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 SPATA6Q9NWH7 488 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-217ENST00000641455 SLC9A2Q9UBY0 812 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 C2orf16Q68DN1 1984 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 EVPLQ92817 2033 aa8.98□□□□□ -0.97
PHGDH-217ENST00000641455 POTEMA6NI47 508 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 SPTLC1O15269 473 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 LAMTOR5O43504 91 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 ZC3H11AO75152 810 aaKnown RBP eCLIP8.97□□□□□ -0.97
PHGDH-217ENST00000641455 ITGB5P18084 799 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 KLRC2P26717 231 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 FAM189BP81408 668 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 GIT2Q14161 759 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 GRM4Q14833 912 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 PPM1JQ5JR12 505 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 CLLU1OSQ5K130 101 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 C20orf194Q5TEA3 1177 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 DCLRE1AQ6PJP8 1040 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 POTEGQ6S5H5 508 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 ECHDC2Q86YB7 292 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms