RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 FECHP22830 423 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 NR2F2P24468 414 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 PRKCEQ02156 737 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 SREBF2Q12772 1141 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 LRRC41Q15345 812 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 HSP90AA4PQ58FG1 418 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 WDR78Q5VTH9 848 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 ARMCX5Q6P1M9 558 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 SEPT14Q6ZU15 432 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 TMTC1Q8IUR5 882 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 CREBRFQ8IUR6 639 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 HPS3Q969F9 1004 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 CCDC102AQ96A19 550 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 CEP170P1Q96L14 293 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 IFT74Q96LB3 600 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 PURBQ96QR8 312 aaKnown RBP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 ACCSQ96QU6 501 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 BAG1Q99933 345 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 NIFKQ9BYG3 293 aaKnown RBP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 MLXIPQ9HAP2 919 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 ZNHIT6Q9NWK9 470 aaKnown RBP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 WRAP73Q9P2S5 460 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 FRMD4BQ9Y2L6 1034 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 ASTN1O14525 1302 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 EMSYQ7Z589 1322 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 SYNGAP1Q96PV0 1343 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 GTPBP10A4D1E9 387 aaKnown RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 SLC15A5A6NIM6 579 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 RSPH10B2B2RC85 870 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 K7ENM7 598 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 NOP56O00567 594 aaKnown RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 KIAA0391O15091 583 aaKnown RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 TEX33O43247 280 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 USO1O60763 962 aaKnown RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 LGR5O75473 907 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 NR3C1P04150 777 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 OATP04181 439 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 RSPH10BP0C881 870 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 TRIM21P19474 475 aaKnown RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 PSMC2P35998 433 aaKnown RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 NCKAP1LP55160 1127 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 GTF2BQ00403 316 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 CACNB1Q02641 598 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 RAD51AP2Q09MP3 1159 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 MAPK7Q13164 816 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 LAMC2Q13753 1193 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 GRB14Q14449 540 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 ARID5BQ14865 1188 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 Q3C1V9 767 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 ZNF792Q3KQV3 632 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 CELF3Q5SZQ8 465 aaKnown RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 SWSAP1Q6NVH7 229 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 RGMBQ6NW40 437 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 MAMDC4Q6UXC1 1216 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 CYFIP1Q7L576 1253 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 PLPPR4Q7Z2D5 763 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 PLEKHH3Q7Z736 793 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 USP37Q86T82 979 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 RASAL3Q86YV0 1011 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 TRIM59Q8IWR1 403 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 NELFCDQ8IXH7 590 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 SYCP3Q8IZU3 236 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 TC2NQ8N9U0 490 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 EMID1Q96A84 441 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 ZNF830Q96NB3 372 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 NTPCRQ9BSD7 190 aaKnown RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 STRA6Q9BX79 667 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 RRAGDQ9NQL2 400 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 CYP26B1Q9NR63 512 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 TBC1D7Q9P0N9 293 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 ARMCX3Q9UH62 379 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 DDX41Q9UJV9 622 aaKnown RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 CAPN11Q9UMQ6 739 aa10.69□□□□□ -0.7
PHGDH-215ENST00000641371 LUC7L2Q9Y383 392 aaKnown RBP10.69□□□□□ -0.7
PHGDH-215ENST00000641371 RBM47A0AV96 593 aaKnown RBP10.68□□□□□ -0.7
PHGDH-215ENST00000641371 N4BP1O75113 896 aaKnown RBP10.68□□□□□ -0.7
PHGDH-215ENST00000641371 OFD1O75665 1012 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 PRPF6O94906 941 aaKnown RBP10.68□□□□□ -0.7
PHGDH-215ENST00000641371 GGPS1O95749 300 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 MYBP10242 640 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 CYP2C8P10632 490 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 XRCC5P13010 732 aaKnown RBP10.68□□□□□ -0.7
PHGDH-215ENST00000641371 ADORA2AP29274 412 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 STAT5BP51692 787 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 ZNF157P51786 506 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-215ENST00000641371 ZBED6P86452 979 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 LRMPQ12912 555 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 UGCGQ16739 394 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 MIIPQ5JXC2 388 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 CYP26C1Q6V0L0 522 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 ANO5Q75V66 913 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 CCDC60Q8IWA6 550 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-215ENST00000641371 DHX37Q8IY37 1157 aaKnown RBP10.68□□□□□ -0.7
PHGDH-215ENST00000641371 TXLNBQ8N3L3 684 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 ANKRD13CQ8N6S4 541 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 OR8K1Q8NGG5 319 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 TCP11Q8WWU5 503 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms