RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 RTN4Q9NQC3 1192 aaKnown RBP10.16□□□□□ -0.78
SCARB2-225ENST00000640900 XPNPEP1Q9NQW7 623 aa10.16□□□□□ -0.78
SCARB2-225ENST00000640900 NRCAMQ92823 1304 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 RRN3P2A6NIE6 340 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 GTPBP6O43824 516 aaPredicted RBP10.15□□□□□ -0.78
SCARB2-225ENST00000640900 KLRC4O43908 158 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 TRAK2O60296 914 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 KINO60870 393 aaKnown RBP10.15□□□□□ -0.78
SCARB2-225ENST00000640900 DGAT1O75907 488 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 C22orf31O95567 290 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 MYL3P08590 195 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 RFC5P40937 340 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 CDK7P50613 346 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 PTPN11Q06124 597 aaPredicted RBP10.15□□□□□ -0.78
SCARB2-225ENST00000640900 DPYDQ12882 1025 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 MAPK7Q13164 816 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 GIT2Q14161 759 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 PLA2G4FQ68DD2 849 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 PADI6Q6TGC4 694 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 DAW1Q8N136 415 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 CNNM3Q8NE01 707 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 DCBLD2Q96PD2 775 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 TIPINQ9BVW5 301 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 TMEM63CQ9P1W3 806 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 TUBE1Q9UJT0 475 aa10.15□□□□□ -0.78
SCARB2-225ENST00000640900 A0A1W2PQ45 241 aaPredicted RBP10.14□□□□□ -0.79
SCARB2-225ENST00000640900 A0A1W2PQY0 241 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 GAS2O43903 313 aaKnown RBP10.14□□□□□ -0.79
SCARB2-225ENST00000640900 SMIM10L2AP0DMW4 78 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 SMIM10L2BP0DMW5 78 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 MARK3P27448 753 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 ARL2P36404 184 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 RTP1P59025 263 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 AMPD3Q01432 767 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 CUL4BQ13620 913 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 SNX17Q15036 470 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 POSTNQ15063 836 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 ZRSR1Q15695 479 aaKnown RBP10.14□□□□□ -0.79
SCARB2-225ENST00000640900 GRIK4Q16099 956 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 NBPF20Q3BBV1 942 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 XKR9Q5GH70 373 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 C1orf53Q5VUE5 145 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 RPAINQ86UA6 219 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 EXOC8Q8IYI6 725 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 GRAMD1CQ8IYS0 662 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 CEP57L1Q8IYX8 460 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 LMBR1Q8WVP7 490 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 DDX12PQ92771 950 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 CEP170P1Q96L14 293 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 FIZ1Q96SL8 496 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 NTPCRQ9BSD7 190 aaKnown RBP10.14□□□□□ -0.79
SCARB2-225ENST00000640900 LRRC27Q9C0I9 530 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 HDAC6Q9UBN7 1215 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 SEPT9Q9UHD8 586 aaPredicted RBP10.14□□□□□ -0.79
SCARB2-225ENST00000640900 GTF2IRD1Q9UHL9 959 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 PCDHA2Q9Y5H9 948 aa10.14□□□□□ -0.79
SCARB2-225ENST00000640900 PVALEFA0A1B0GWK0 134 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 ARHGEF35A5YM69 484 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 RIOK3O14730 519 aaKnown RBP10.13□□□□□ -0.79
SCARB2-225ENST00000640900 MAGEB2O15479 319 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 GABBR2O75899 941 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 PPFIA1Q13136 1202 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 ITGA7Q13683 1181 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 KCNB1Q14721 858 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 CCDC183Q5T5S1 534 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 GPBP1Q86WP2 473 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 MCPH1Q8NEM0 835 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 RASSF8Q8NHQ8 419 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 REEP2Q9BRK0 252 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 STRA6Q9BX79 667 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 NUP62CLQ9H1M0 184 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 ODF2LQ9ULJ1 636 aa10.13□□□□□ -0.79
SCARB2-225ENST00000640900 KAT6AQ92794 2004 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 TRIP12Q14669 1992 aaPredicted RBP10.12□□□□□ -0.79
SCARB2-225ENST00000640900 ARVCFO00192 962 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 RHOBTB3O94955 611 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 KLRC1P26715 233 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 CASP1P29466 404 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 AFMP43652 599 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 POU5F1BQ06416 359 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 RBL2Q08999 1139 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 DRP2Q13474 957 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 PNOCQ13519 176 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 EMC2Q15006 297 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 TRIM71Q2Q1W2 868 aaKnown RBP10.12□□□□□ -0.79
SCARB2-225ENST00000640900 MTERF2Q49AM1 385 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 GDF6Q6KF10 455 aaPredicted RBP10.12□□□□□ -0.79
SCARB2-225ENST00000640900 MTHFD1LQ6UB35 978 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 UNC13DQ70J99 1090 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 SERINC5Q86VE9 423 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 CKAP2LQ8IYA6 745 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 KIAA0319LQ8IZA0 1049 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 TRAPPC12Q8WVT3 735 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 STAMQ92783 540 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 GLT1D1Q96MS3 346 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 GSDMAQ96QA5 445 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 JPH2Q9BR39 696 aaPredicted RBP10.12□□□□□ -0.79
SCARB2-225ENST00000640900 SH2D3AQ9BRG2 576 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms