RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 RAPGEF6Q8TEU7 1601 aa4.57□□□□□ -1.68
ATM-230ENST00000640388 TDRD9Q8NDG6 1382 aaKnown RBP4.56□□□□□ -1.68
ATM-230ENST00000640388 ZNF891A8MT65 544 aaPredicted RBP4.56□□□□□ -1.68
ATM-230ENST00000640388 B4GALT3O60512 393 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 B4GALT4O60513 344 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 MYCLP1P12525 358 aaPredicted RBP4.56□□□□□ -1.68
ATM-230ENST00000640388 ATP2A2P16615 1042 aaKnown RBP4.56□□□□□ -1.68
ATM-230ENST00000640388 PTX3P26022 381 aaPredicted RBP4.56□□□□□ -1.68
ATM-230ENST00000640388 ADCY8P40145 1251 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 ZFYVE27Q5T4F4 411 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 KBTBD2Q8IY47 623 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 PPM1KQ8N3J5 372 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 MBD6Q96DN6 1003 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 BORCS6Q96GS4 357 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 OXSMQ9NWU1 459 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 ADAM29Q9UKF5 820 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 PBRM1Q86U86 1689 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 KIAA0586Q9BVV6 1533 aa4.56□□□□□ -1.68
ATM-230ENST00000640388 WDR97A6NE52 1622 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 F2P00734 622 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 CYP17A1P05093 508 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 ADRB1P08588 477 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 CELA3BP08861 270 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 HSD3B2P26439 372 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 POLD1P28340 1107 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 SCNN1BP51168 640 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 CD83Q01151 205 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 DSG1Q02413 1049 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 SART3Q15020 963 aaKnown RBP4.55□□□□□ -1.68
ATM-230ENST00000640388 TAF7LQ5H9L4 462 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 CXXC5Q7LFL8 322 aaKnown RBP4.55□□□□□ -1.68
ATM-230ENST00000640388 GPR155Q7Z3F1 870 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 KIF18BQ86Y91 864 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 CALML6Q8TD86 181 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 FOXRED1Q96CU9 486 aaPredicted RBP4.55□□□□□ -1.68
ATM-230ENST00000640388 ELF4Q99607 663 aaPredicted RBP4.55□□□□□ -1.68
ATM-230ENST00000640388 ORAI3Q9BRQ5 295 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 OR10A5Q9H207 317 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 SLKQ9H2G2 1235 aaPredicted RBP4.55□□□□□ -1.68
ATM-230ENST00000640388 TOMM22Q9NS69 142 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 THG1LQ9NWX6 298 aaKnown RBP4.55□□□□□ -1.68
ATM-230ENST00000640388 H2AFY2Q9P0M6 372 aaPredicted RBP4.55□□□□□ -1.68
ATM-230ENST00000640388 DNMBPQ6XZF7 1577 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 MROH2BQ7Z745 1585 aa4.55□□□□□ -1.68
ATM-230ENST00000640388 ZNF536O15090 1300 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 A0A087X0B3 334 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 GSG1L2A8MUP6 293 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 PDE8AO60658 829 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 CLSTN1O94985 981 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 FNTBP49356 437 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 EFEMP1Q12805 493 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 TOP3AQ13472 1001 aaPredicted RBP4.54□□□□□ -1.68
ATM-230ENST00000640388 STILQ15468 1287 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 SEPT7Q16181 437 aaKnown RBP4.54□□□□□ -1.68
ATM-230ENST00000640388 KANK2Q63ZY3 851 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 CREB3L3Q68CJ9 461 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 OTOP2Q7RTS6 562 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 PRRT2Q7Z6L0 340 aaPredicted RBP4.54□□□□□ -1.68
ATM-230ENST00000640388 PLEKHH3Q7Z736 793 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 RALYLQ86SE5 291 aaKnown RBP4.54□□□□□ -1.68
ATM-230ENST00000640388 RTN4RL1Q86UN2 441 aaPredicted RBP4.54□□□□□ -1.68
ATM-230ENST00000640388 CHTF18Q8WVB6 975 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 LEO1Q8WVC0 666 aaPredicted RBP4.54□□□□□ -1.68
ATM-230ENST00000640388 E2F7Q96AV8 911 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 AJUBAQ96IF1 538 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 BDH2Q9BUT1 245 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 KATNBL1Q9H079 304 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.54□□□□□ -1.68
ATM-230ENST00000640388 CDC42EP3Q9UKI2 254 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 CNOT11Q9UKZ1 510 aaKnown RBP4.54□□□□□ -1.68
ATM-230ENST00000640388 PTPN22Q9Y2R2 807 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 SPO11Q9Y5K1 396 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 POLA1P09884 1462 aaPredicted RBP4.54□□□□□ -1.68
ATM-230ENST00000640388 RAD54L2Q9Y4B4 1467 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 KIAA0556O60303 1618 aa4.54□□□□□ -1.68
ATM-230ENST00000640388 ZNF335Q9H4Z2 1342 aaPredicted RBP4.53□□□□□ -1.68
ATM-230ENST00000640388 UBA6A0AVT1 1052 aaPredicted RBP4.53□□□□□ -1.68
ATM-230ENST00000640388 CUTAO60888 179 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 ZNF888P0CJ79 500 aaPredicted RBP4.53□□□□□ -1.68
ATM-230ENST00000640388 APEX1P27695 318 aaKnown RBP4.53□□□□□ -1.68
ATM-230ENST00000640388 CSF2RBP32927 897 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 RGS3P49796 1198 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 KCNQ1P51787 676 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 KPNA1P52294 538 aaPredicted RBP4.53□□□□□ -1.68
ATM-230ENST00000640388 RRADP55042 308 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 SLC6A3Q01959 620 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 ALDH6A1Q02252 535 aaKnown RBP4.53□□□□□ -1.68
ATM-230ENST00000640388 PLP2Q04941 152 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 MOGSQ13724 837 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 USP10Q14694 798 aaKnown RBP4.53□□□□□ -1.68
ATM-230ENST00000640388 TBC1D10BQ4KMP7 808 aaPredicted RBP4.53□□□□□ -1.68
ATM-230ENST00000640388 ARHGEF18Q6ZSZ5 1173 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 REXO1L1PQ8IX06 675 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 IFNL2Q8IZJ0 200 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 SMC1BQ8NDV3 1235 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 OR2W6PQ8NHA6 318 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 C16orf92Q96LL3 132 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 GPR101Q96P66 508 aaPredicted RBP4.53□□□□□ -1.68
ATM-230ENST00000640388 TUBGCP5Q96RT8 1024 aa4.53□□□□□ -1.68
ATM-230ENST00000640388 FOXB1Q99853 325 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms