RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 COL6A2P12110 1019 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 PHKG2P15735 406 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 CD40P25942 277 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 PLEKHN1Q494U1 663 aaPredicted RBP8.11□□□□□ -1.11
RFC1-217ENST00000639695 FRMD5Q7Z6J6 570 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 PTRH1Q86Y79 214 aaKnown RBP8.11□□□□□ -1.11
RFC1-217ENST00000639695 ADGRG2Q8IZP9 1017 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 DPF3Q92784 378 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 TIFAQ96CG3 184 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 ACAP3Q96P50 834 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 NMRK2Q9NPI5 230 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 SAP30BPQ9UHR5 308 aaKnown RBP8.11□□□□□ -1.11
RFC1-217ENST00000639695 FBXL7Q9UJT9 491 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 FRMPD2Q68DX3 1309 aaPredicted RBP8.1□□□□□ -1.11
RFC1-217ENST00000639695 IFRD1O00458 451 aaPredicted RBP8.1□□□□□ -1.11
RFC1-217ENST00000639695 KRIT1O00522 736 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 PCDHGA12O60330 932 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 AMY2AP04746 511 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 AMY2BP19961 511 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 AKAP5P24588 427 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 ARL4AP40617 200 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 GPR3P46089 330 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 ZNF200P98182 395 aaPredicted RBP8.1□□□□□ -1.11
RFC1-217ENST00000639695 EFEMP1Q12805 493 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 MORC3Q14149 939 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 RTP5Q14D33 572 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 COBLL1Q53SF7 1204 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 IFIT1BQ5T764 474 aaKnown RBP8.1□□□□□ -1.11
RFC1-217ENST00000639695 OTOP3Q7RTS5 596 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 SSH1Q8WYL5 1049 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 IL17RAQ96F46 866 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 C1orf112Q9NSG2 853 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 MARCH2Q9P0N8 246 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 DSEQ9UL01 958 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 PCDHGA9Q9Y5G4 932 aaKnown RBP8.1□□□□□ -1.11
RFC1-217ENST00000639695 PCDHGA8Q9Y5G5 932 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 PCDHGA7Q9Y5G6 932 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 PCDHGA6Q9Y5G7 932 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 PCDHGA3Q9Y5H0 932 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 PCDHGA2Q9Y5H1 932 aa8.1□□□□□ -1.11
RFC1-217ENST00000639695 A0A1W2PQ45 241 aaPredicted RBP8.09□□□□□ -1.11
RFC1-217ENST00000639695 A0A1W2PQY0 241 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 ANO9A1A5B4 782 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 C22orf46C9J442 243 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 KDM1AO60341 852 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 SLURP1P55000 103 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 MVKQ03426 396 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 SAFBQ15424 915 aaKnown RBP eCLIP8.09□□□□□ -1.11
RFC1-217ENST00000639695 RRP12Q5JTH9 1297 aaKnown RBP8.09□□□□□ -1.11
RFC1-217ENST00000639695 C11orf96Q7Z7L8 435 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 CMIPQ8IY22 773 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 BDH2Q9BUT1 245 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 CSRNP2Q9H175 543 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 ANLNQ9NQW6 1124 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 X6R8D5 127 aa8.09□□□□□ -1.11
RFC1-217ENST00000639695 A0A1B0GTL3 188 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 SCDO00767 359 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 KCNK3O14649 394 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 MAFKO60675 156 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 CTNND1O60716 968 aaKnown RBP8.08□□□□□ -1.12
RFC1-217ENST00000639695 H2AFYO75367 372 aaKnown RBP8.08□□□□□ -1.12
RFC1-217ENST00000639695 OFD1O75665 1012 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 ASGR2P07307 311 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 FBLN1P23142 703 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 HTRA3P83110 453 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 GRM3Q14832 879 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 HSP90AB4PQ58FF6 505 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 FIGNQ5HY92 759 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 HABP4Q5JVS0 413 aaKnown RBP8.08□□□□□ -1.12
RFC1-217ENST00000639695 MROH9Q5TGP6 573 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 IL31Q6EBC2 164 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 KRTAP5-3Q6L8H2 238 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 CC2D1AQ6P1N0 951 aaPredicted RBP8.08□□□□□ -1.12
RFC1-217ENST00000639695 NLRP10Q86W26 655 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 TEX2Q8IWB9 1127 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 Q8N1Y9 231 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 MIER2Q8N344 545 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 TEKT5Q96M29 485 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 ARPC5LQ9BPX5 153 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 DNAJC28Q9NX36 388 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.08□□□□□ -1.12
RFC1-217ENST00000639695 USP36Q9P275 1121 aaKnown RBP8.08□□□□□ -1.12
RFC1-217ENST00000639695 GULP1Q9UBP9 304 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 SRPK3Q9UPE1 567 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 B3GALT1Q9Y5Z6 326 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 ATP23Q9Y6H3 246 aa8.08□□□□□ -1.12
RFC1-217ENST00000639695 MAN2B1O00754 1011 aa8.07□□□□□ -1.12
RFC1-217ENST00000639695 DVL2O14641 736 aa8.07□□□□□ -1.12
RFC1-217ENST00000639695 NKRFO15226 690 aaKnown RBP eCLIP8.07□□□□□ -1.12
RFC1-217ENST00000639695 AP1G1O43747 822 aa8.07□□□□□ -1.12
RFC1-217ENST00000639695 CLASP2O75122 1294 aaKnown RBP8.07□□□□□ -1.12
RFC1-217ENST00000639695 PLA2G1BP04054 148 aaKnown RBP8.07□□□□□ -1.12
RFC1-217ENST00000639695 FUCA1P04066 466 aa8.07□□□□□ -1.12
RFC1-217ENST00000639695 FPR2P25090 351 aa8.07□□□□□ -1.12
RFC1-217ENST00000639695 DHX8Q14562 1220 aaKnown RBP8.07□□□□□ -1.12
RFC1-217ENST00000639695 VWA3BQ502W6 1294 aa8.07□□□□□ -1.12
RFC1-217ENST00000639695 NME9Q86XW9 330 aa8.07□□□□□ -1.12
RFC1-217ENST00000639695 NOSTRINQ8IVI9 506 aa8.07□□□□□ -1.12
RFC1-217ENST00000639695 SLC35G2Q8TBE7 412 aa8.07□□□□□ -1.12
RFC1-217ENST00000639695 SLC6A20Q9NP91 592 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms