RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 BTBD18B2RXH4 712 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 RPS6KA5O75582 802 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 GUCY1B3Q02153 619 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 MTERF2Q49AM1 385 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 FAM228AQ86W67 206 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 CEP89Q96ST8 783 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 WRAP73Q9P2S5 460 aaPredicted RBP19.96■□□□□ 0.79
PNKP-230ENST00000638016 ST3GAL5Q9UNP4 418 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 CEP131Q9UPN4 1083 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 AKT3Q9Y243 479 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 SQORQ9Y6N5 450 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 ADGRA3Q8IWK6 1321 aa19.96■□□□□ 0.79
PNKP-230ENST00000638016 MMP1P03956 469 aa19.95■□□□□ 0.78
PNKP-230ENST00000638016 TARBP2Q15633 366 aaKnown RBP19.95■□□□□ 0.78
PNKP-230ENST00000638016 PAN2Q504Q3 1202 aaKnown RBP19.95■□□□□ 0.78
PNKP-230ENST00000638016 PLA2G4FQ68DD2 849 aa19.95■□□□□ 0.78
PNKP-230ENST00000638016 PPP4R3AQ6IN85 833 aa19.95■□□□□ 0.78
PNKP-230ENST00000638016 TMEM192Q8IY95 271 aa19.95■□□□□ 0.78
PNKP-230ENST00000638016 DIS3L2Q8IYB7 885 aaKnown RBP19.95■□□□□ 0.78
PNKP-230ENST00000638016 CRIPAKQ8N1N5 446 aa19.95■□□□□ 0.78
PNKP-230ENST00000638016 ZNF689Q96CS4 500 aaPredicted RBP19.95■□□□□ 0.78
PNKP-230ENST00000638016 TSPYL2Q9H2G4 693 aaPredicted RBP19.95■□□□□ 0.78
PNKP-230ENST00000638016 NRBP2Q9NSY0 501 aa19.95■□□□□ 0.78
PNKP-230ENST00000638016 DGKIO75912 1065 aa19.94■□□□□ 0.78
PNKP-230ENST00000638016 CSPG5O95196 566 aa19.94■□□□□ 0.78
PNKP-230ENST00000638016 NLRP11P59045 1033 aaKnown RBP19.94■□□□□ 0.78
PNKP-230ENST00000638016 TJAP1Q5JTD0 557 aa19.94■□□□□ 0.78
PNKP-230ENST00000638016 FIBCD1Q8N539 461 aa19.94■□□□□ 0.78
PNKP-230ENST00000638016 RDM1Q8NG50 284 aa19.94■□□□□ 0.78
PNKP-230ENST00000638016 ADAMTS10Q9H324 1103 aa19.94■□□□□ 0.78
PNKP-230ENST00000638016 LIMCH1Q9UPQ0 1083 aa19.94■□□□□ 0.78
PNKP-230ENST00000638016 MAGEB2O15479 319 aa19.93■□□□□ 0.78
PNKP-230ENST00000638016 GCFC2P16383 781 aaKnown RBP19.93■□□□□ 0.78
PNKP-230ENST00000638016 FGFR4P22455 802 aa19.93■□□□□ 0.78
PNKP-230ENST00000638016 CTNNB1P35222 781 aa19.93■□□□□ 0.78
PNKP-230ENST00000638016 KCNQ1P51787 676 aa19.93■□□□□ 0.78
PNKP-230ENST00000638016 CRYBB1P53674 252 aaPredicted RBP19.93■□□□□ 0.78
PNKP-230ENST00000638016 TBC1D8BQ0IIM8 1120 aa19.93■□□□□ 0.78
PNKP-230ENST00000638016 PPP2R5CQ13362 524 aa19.93■□□□□ 0.78
PNKP-230ENST00000638016 ZNF579Q8NAF0 562 aaKnown RBP19.93■□□□□ 0.78
PNKP-230ENST00000638016 ASB2Q96Q27 587 aa19.93■□□□□ 0.78
PNKP-230ENST00000638016 ADAM2Q99965 735 aa19.93■□□□□ 0.78
PNKP-230ENST00000638016 FTHL17Q9BXU8 183 aa19.93■□□□□ 0.78
PNKP-230ENST00000638016 MUC3AQ02505 3323 aa19.93■□□□□ 0.78
PNKP-230ENST00000638016 DDX11L8A8MPP1 907 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
PNKP-230ENST00000638016 CSDE1O75534 798 aaKnown RBP19.92■□□□□ 0.78
PNKP-230ENST00000638016 GPC3P51654 580 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 NPEPPSP55786 919 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 SPIRE1Q08AE8 756 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 GPM6BQ13491 265 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 BTG3Q14201 252 aaPredicted RBP19.92■□□□□ 0.78
PNKP-230ENST00000638016 XKR3Q5GH77 459 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 NCAPH2Q6IBW4 605 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 ANO5Q75V66 913 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 NPAS4Q8IUM7 802 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 ATXN2LQ8WWM7 1075 aaKnown RBP19.92■□□□□ 0.78
PNKP-230ENST00000638016 FAM20AQ96MK3 541 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 MAP7D2Q96T17 732 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 NIFKQ9BYG3 293 aaKnown RBP19.92■□□□□ 0.78
PNKP-230ENST00000638016 BMP2KQ9NSY1 1161 aaPredicted RBP19.92■□□□□ 0.78
PNKP-230ENST00000638016 RGL1Q9NZL6 768 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 HCSTQ9UBK5 93 aa19.92■□□□□ 0.78
PNKP-230ENST00000638016 MRPL42Q9Y6G3 142 aaKnown RBP19.92■□□□□ 0.78
PNKP-230ENST00000638016 FNDC1Q4ZHG4 1894 aaPredicted RBP19.92■□□□□ 0.78
PNKP-230ENST00000638016 H3BNC9 293 aa19.91■□□□□ 0.78
PNKP-230ENST00000638016 PSMC5P62195 406 aa19.91■□□□□ 0.78
PNKP-230ENST00000638016 MRPS5P82675 430 aaKnown RBP19.91■□□□□ 0.78
PNKP-230ENST00000638016 NECAB3Q96P71 396 aaPredicted RBP19.91■□□□□ 0.78
PNKP-230ENST00000638016 BRMS1Q9HCU9 246 aa19.91■□□□□ 0.78
PNKP-230ENST00000638016 C9IYK1 514 aa19.9■□□□□ 0.78
PNKP-230ENST00000638016 ZBTB39O15060 712 aa19.9■□□□□ 0.78
PNKP-230ENST00000638016 GRM6O15303 877 aa19.9■□□□□ 0.78
PNKP-230ENST00000638016 MARCH6O60337 910 aa19.9■□□□□ 0.78
PNKP-230ENST00000638016 SARSP49591 514 aaKnown RBP19.9■□□□□ 0.78
PNKP-230ENST00000638016 CYP4A11Q02928 519 aa19.9■□□□□ 0.78
PNKP-230ENST00000638016 CTTNQ14247 550 aaKnown RBP19.9■□□□□ 0.78
PNKP-230ENST00000638016 DYDC2Q96IM9 177 aa19.9■□□□□ 0.78
PNKP-230ENST00000638016 SAMD11Q96NU1 681 aa19.9■□□□□ 0.78
PNKP-230ENST00000638016 LMCD1Q9NZU5 365 aa19.9■□□□□ 0.78
PNKP-230ENST00000638016 ARID2Q68CP9 1835 aa19.9■□□□□ 0.78
PNKP-230ENST00000638016 IGKV6-21A0A0C4DH24 114 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 DENND3A2RUS2 1198 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 TBX3O15119 743 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 GPR182O15218 404 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 FGFR1P11362 822 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 ATP2B1P20020 1258 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 TMOD1P28289 359 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 QARSP47897 775 aaKnown RBP19.89■□□□□ 0.77
PNKP-230ENST00000638016 TRIM29Q14134 588 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 DSC3Q14574 896 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 FAM102BQ5T8I3 360 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 KSR1Q8IVT5 923 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 CLP1Q92989 425 aaKnown RBP19.89■□□□□ 0.77
PNKP-230ENST00000638016 MRPL38Q96DV4 380 aaKnown RBP19.89■□□□□ 0.77
PNKP-230ENST00000638016 SCLT1Q96NL6 688 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 LXNQ9BS40 222 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 TMEM60Q9H2L4 133 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 RGS18Q9NS28 235 aa19.89■□□□□ 0.77
PNKP-230ENST00000638016 BMPR1AP36894 532 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms