RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 TM6SF1Q9BZW5 370 aa20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 ZMYM3Q14202 1370 aa20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 NAALADL2Q58DX5 795 aa20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 KRT27Q7Z3Y8 459 aa20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 MICALL2Q8IY33 904 aa20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 TOP2BQ02880 1626 aa20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 GCC2Q8IWJ2 1684 aa20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 CMA1P23946 247 aa20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 NR2F2P24468 414 aa20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 KPNB1Q14974 876 aaKnown RBP20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 TBC1D1Q86TI0 1168 aaPredicted RBP20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 FOSP01100 380 aaPredicted RBP20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 MAN2A1Q16706 1144 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 HIPK4Q8NE63 616 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 FBXO18Q8NFZ0 1043 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 PSD3Q9NYI0 1048 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 PCDHB8Q9UN66 801 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 ZNF197O14709 1029 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 ZSCAN20P17040 1043 aaPredicted RBP20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 C11orf88Q6PI97 169 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 SLC7A5P2Q9GIP4 190 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 UTP6Q9NYH9 597 aaKnown RBP20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 PA2G4Q9UQ80 394 aaKnown RBP20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 SPAG17Q6Q759 2223 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 CASP8Q14790 479 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 C16orf89Q6UX73 402 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 ELMOD1Q8N336 334 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 IFT43Q96FT9 208 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 ZMYM6O95789 1325 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 H0Y3Z8 333 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 TALDO1P37837 337 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 ODR4Q5SWX8 454 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 SARM1Q6SZW1 724 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 FAM149B1Q96BN6 582 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 PCF11O94913 1555 aaKnown RBP20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 WDR91A4D1P6 747 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 MTERF3Q96E29 417 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 DSCC1Q9BVC3 393 aa20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 RP1L1Q8IWN7 2480 aaPredicted RBP20.57■□□□□ 0.88
CACNA1A-257ENST00000638009 ADCK5Q3MIX3 580 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 PLA2G4DQ86XP0 818 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 TESK2Q96S53 571 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 PPCSQ9HAB8 311 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 GMNCA6NCL1 334 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 COBLO75128 1261 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 MOCS3O95396 460 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 CAPN1P07384 714 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 DNAL1Q4LDG9 190 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 FAM47CQ5HY64 1035 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 HIBADHP31937 336 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 ARHGAP17Q68EM7 881 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 ADD3Q9UEY8 706 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 UBE3AQ05086 875 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 MMRN1Q13201 1228 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 SPATA17Q96L03 361 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 MIF4GDA9UHW6 222 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 NCALDP61601 193 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 NUDT18Q6ZVK8 323 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 CPXCR1Q8N123 301 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 EPC1Q9H2F5 836 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 TBL3Q12788 808 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 BEND6Q5SZJ8 279 aaPredicted RBP20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 NUP107P57740 925 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 LBRQ14739 615 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 PASD1Q8IV76 773 aa20.56■□□□□ 0.88
CACNA1A-257ENST00000638009 GCFC2P16383 781 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 STXBP2Q15833 593 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 GMEB1Q9Y692 573 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 HPCAP84074 193 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 CLEC4FQ8N1N0 589 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 TGS1Q96RS0 853 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 AIPL1Q9NZN9 384 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 PSMD2Q13200 908 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 CALB1P05937 261 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 LRRC31Q6UY01 552 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 TRMT44Q8IYL2 757 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 BLZF1Q9H2G9 400 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 BABAM1Q9NWV8 329 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 MYH7BA7E2Y1 1941 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 TBC1D12O60347 775 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 OSBPL9Q96SU4 736 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 UBAP1Q9NZ09 502 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 ABCC1P33527 1531 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 KRT6AP02538 564 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 KRT6BP04259 564 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 KRT6CP48668 564 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 PURAQ00577 322 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 NAA35Q5VZE5 725 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 FASTKD5Q7L8L6 764 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 GANCQ8TET4 914 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 FAF2Q96CS3 445 aa20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 SRPK1Q96SB4 655 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-257ENST00000638009 THOC7Q6I9Y2 204 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 KSR1Q8IVT5 923 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 EME1Q96AY2 570 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 KRT40Q6A162 431 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 SLC24A3Q9HC58 644 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms