RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 TBC1D22BQ9NU19 505 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 VAV3Q9UKW4 847 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 PCDHGC5Q9Y5F6 944 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 PCDHA10Q9Y5I2 948 aa8.87□□□□□ -0.99
PNKP-229ENST00000637897 PLXNA4Q9HCM2 1894 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 IGKV6-21A0A0C4DH24 114 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 TNFRSF10AO00220 468 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 CHMP2AO43633 222 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 GTPBP6O43824 516 aaPredicted RBP8.86□□□□□ -0.99
PNKP-229ENST00000637897 ST18O60284 1047 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 JAK2O60674 1132 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 CSDE1O75534 798 aaKnown RBP8.86□□□□□ -0.99
PNKP-229ENST00000637897 OATP04181 439 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 IRS1P35568 1242 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 BMPR1AP36894 532 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 PRKCEQ02156 737 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 SPIRE1Q08AE8 756 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 NR5A1Q13285 461 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 GPM6BQ13491 265 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 FAM102BQ5T8I3 360 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 IER5Q5VY09 327 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 LRRC55Q6ZSA7 311 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 SMAP1Q8IYB5 467 aaPredicted RBP8.86□□□□□ -0.99
PNKP-229ENST00000637897 NME8Q8N427 588 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 NSUN7Q8NE18 718 aaKnown RBP8.86□□□□□ -0.99
PNKP-229ENST00000637897 CCDC148Q8NFR7 591 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 NEK9Q8TD19 979 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 CCDC12Q8WUD4 166 aaPredicted RBP8.86□□□□□ -0.99
PNKP-229ENST00000637897 HLA-CQ95604 372 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 UHRF1Q96T88 793 aaPredicted RBP8.86□□□□□ -0.99
PNKP-229ENST00000637897 RIT2Q99578 217 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 UBE2ZQ9H832 354 aaPredicted RBP8.86□□□□□ -0.99
PNKP-229ENST00000637897 ST3GAL5Q9UNP4 418 aa8.86□□□□□ -0.99
PNKP-229ENST00000637897 STK36Q9NRP7 1315 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 WDR64B1ANS9 1081 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 K7ELQ4 463 aaPredicted RBP8.85□□□□□ -0.99
PNKP-229ENST00000637897 ZBTB39O15060 712 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 LINC01565O15544 149 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 ITGB1P05556 798 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 PSAPP07602 524 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 IL9P15248 144 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 ATF7P17544 494 aaPredicted RBP8.85□□□□□ -0.99
PNKP-229ENST00000637897 FGFR4P22455 802 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 PLA2G5P39877 138 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 HYAL1Q12794 435 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 NBR1Q14596 966 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 SKIV2LQ15477 1246 aaKnown RBP8.85□□□□□ -0.99
PNKP-229ENST00000637897 CTC1Q2NKJ3 1217 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 LRCH2Q5VUJ6 765 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 FAM160B1Q5W0V3 765 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 MCTP2Q6DN12 878 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 EFCAB12Q6NXP0 572 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 MOXD1Q6UVY6 613 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 ANO5Q75V66 913 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 ADGRD2Q7Z7M1 963 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 RSPH3Q86UC2 560 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 FIBCD1Q8N539 461 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 SPPL3Q8TCT6 385 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 BICD2Q8TD16 824 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 SYMPKQ92797 1274 aaKnown RBP8.85□□□□□ -0.99
PNKP-229ENST00000637897 NIFKQ9BYG3 293 aaKnown RBP8.85□□□□□ -0.99
PNKP-229ENST00000637897 EPHX3Q9H6B9 360 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 CWH43Q9H720 699 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 ALG13Q9NP73 1137 aaKnown RBP8.85□□□□□ -0.99
PNKP-229ENST00000637897 C11orf16Q9NQ32 467 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 RGS18Q9NS28 235 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 CHMP5Q9NZZ3 219 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 PLAGL2Q9UPG8 496 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 GINS2Q9Y248 185 aa8.85□□□□□ -0.99
PNKP-229ENST00000637897 GAS7O60861 476 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 RPS6KA5O75582 802 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 FGFR1P11362 822 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 SARSP49591 514 aaKnown RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 MCM2P49736 904 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 GPC3P51654 580 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 CRYBB1P53674 252 aaPredicted RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 NLRP11P59045 1033 aaKnown RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 RBM10P98175 930 aaKnown RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 AKAP17AQ02040 695 aaKnown RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 NFX1Q12986 1120 aaKnown RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 PAK2Q13177 524 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 BTG3Q14201 252 aaPredicted RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 LEXMQ3ZCV2 418 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 PAN2Q504Q3 1202 aaKnown RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 PLA2G4FQ68DD2 849 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 ZNF598Q86UK7 904 aaKnown RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 POTEDQ86YR6 584 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 NPAS4Q8IUM7 802 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 KSR1Q8IVT5 923 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 CMTR2Q8IYT2 770 aaKnown RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 BANK1Q8NDB2 785 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 GTF3C6Q969F1 213 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 SAMD11Q96NU1 681 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 CASD1Q96PB1 797 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 ADAM2Q99965 735 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 TEKT3Q9BXF9 490 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 FTHL17Q9BXU8 183 aa8.84□□□□□ -0.99
PNKP-229ENST00000637897 SLKQ9H2G2 1235 aaPredicted RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 CIZ1Q9ULV3 898 aaPredicted RBP8.84□□□□□ -0.99
PNKP-229ENST00000637897 COG5Q9UP83 839 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms