RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 PPP1R14CQ8TAE6 165 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 SREK1Q8WXA9 508 aaKnown RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 CASKIN2Q8WXE0 1202 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 MED15Q96RN5 788 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 SH3GL1Q99961 368 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 USP44Q9H0E7 712 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 TAOK3Q9H2K8 898 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 EPB41L5Q9HCM4 733 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 INIPQ9NRY2 104 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 FAIMQ9NVQ4 179 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 SCHIP1Q9P0W5 487 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-211ENST00000637881 CAPN11Q9UMQ6 739 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 CHMP2BQ9UQN3 213 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 ARL2BPQ9Y2Y0 163 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 FADS3Q9Y5Q0 445 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 CAPN6Q9Y6Q1 641 aa8.53□□□□□ -1.04
CDKL5-211ENST00000637881 MYH10P35580 1976 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 TTI1O43156 1089 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 TIMM44O43615 452 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 UPP2O95045 317 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 GLI1P08151 1106 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 PIM1P11309 404 aaPredicted RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 TCF7P36402 384 aaPredicted RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 RGS2P41220 211 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 MMP13P45452 471 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 CLCN2P51788 898 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 COPB1P53618 953 aaKnown RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 MAGOHP61326 146 aaKnown RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 MKRN3Q13064 507 aaKnown RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 RCN2Q14257 317 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 RCN1Q15293 331 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 P3H1Q32P28 736 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 ZNF394Q53GI3 561 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 RNF43Q68DV7 783 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 LONP2Q86WA8 852 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 MAP7D3Q8IWC1 876 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 TRMT44Q8IYL2 757 aaKnown RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 LRRC34Q8IZ02 419 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 SCAIQ8N9R8 606 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 ZNF579Q8NAF0 562 aaKnown RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 ZBTB38Q8NAP3 1195 aaPredicted RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 NAT14Q8WUY8 206 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 MAGOHBQ96A72 148 aaKnown RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 FAM227BQ96M60 508 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 NUDCD1Q96RS6 583 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 NYXQ9GZU5 481 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 STMN4Q9H169 189 aaPredicted RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 SPON1Q9HCB6 807 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 POLD4Q9HCU8 107 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 NKX1-2Q9UD57 310 aaPredicted RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 SAP30BPQ9UHR5 308 aaKnown RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 NOVA2Q9UNW9 492 aaKnown RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 STK38LQ9Y2H1 464 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 USP20Q9Y2K6 914 aa8.52□□□□□ -1.05
CDKL5-211ENST00000637881 GOLGB1Q14789 3259 aaKnown RBP8.52□□□□□ -1.05
CDKL5-211ENST00000637881 A0A0D9SFI3 127 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 KANSL1LA0AUZ9 987 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 EIF3FO00303 357 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 SART1O43290 800 aaKnown RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 KDM1AO60341 852 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 HNRNPCL1O60812 293 aaKnown RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 CBFA2T3O75081 653 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 ATP9AO75110 1047 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 UNC5CO95185 931 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 NTSR2O95665 410 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 ASMTLO95671 621 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 EIF2S1P05198 315 aaKnown RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 PRELPP51888 382 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 EXOSC10Q01780 885 aaKnown RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 TRIM28Q13263 835 aaKnown RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 ACVR2BQ13705 512 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 TTF1Q15361 905 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 UAP1Q16222 522 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 PRR5LQ6MZQ0 368 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 NEPROQ6NW34 567 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 PACS1Q6VY07 963 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 MARK2Q7KZI7 788 aaKnown RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 DZIP1Q86YF9 867 aaKnown RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 CROCCP3Q8IVE0 287 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 SCUBE1Q8IWY4 988 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 FAM186BQ8IYM0 893 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 ST13P4Q8IZP2 240 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 ANKK1Q8NFD2 765 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 RNF25Q96BH1 459 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 PGM2Q96G03 612 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 SUCLG2Q96I99 432 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 ELAC2Q9BQ52 826 aaKnown RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 RETREG1Q9H6L5 497 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 SH2D4AQ9H788 454 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 RBM12Q9NTZ6 932 aaKnown RBP8.51□□□□□ -1.05
CDKL5-211ENST00000637881 NMRK1Q9NWW6 199 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 AIPL1Q9NZN9 384 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 DKK3Q9UBP4 350 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 MYH6P13533 1939 aa8.51□□□□□ -1.05
CDKL5-211ENST00000637881 LSM1O15116 133 aaKnown RBP8.5□□□□□ -1.05
CDKL5-211ENST00000637881 PCCAP05165 728 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms