RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 VTNP04004 478 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 ADD1P35611 737 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 RCAN1P53805 252 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 KCNC3Q14003 757 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 BMP2KLQ5H9B9 411 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 ODR4Q5SWX8 454 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 ZNF746Q6NUN9 644 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 LRRC55Q6ZSA7 311 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 TRIM67Q6ZTA4 783 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 SKAP1Q86WV1 359 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 LINC01465Q8N7H1 131 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 CDCA3Q99618 268 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 ZNF577Q9BSK1 485 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 PHF7Q9BWX1 381 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 ELAC1Q9H777 363 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 AAASQ9NRG9 546 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 TMEM161AQ9NX61 479 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 KAT6AQ92794 2004 aa13.78□□□□□ -0.2
CACNA1A-250ENST00000637809 ESYT2A0FGR8 921 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 TMEM221A6NGB7 291 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 M0R296 226 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 ATF7P17544 494 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 ZXDAP98168 799 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 PKN1Q16512 942 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 SPOUT1Q5T280 376 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 IER5LQ5T953 404 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 TMEM184AQ6ZMB5 413 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 MICAL1Q8TDZ2 1067 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 CASD1Q96PB1 797 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 ZMYND12Q9H0C1 365 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 S1PR5Q9H228 398 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 ADAMTS10Q9H324 1103 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 ATP6V0A4Q9HBG4 840 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 TBC1D22BQ9NU19 505 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 LZTS1Q9Y250 596 aa13.77□□□□□ -0.21
CACNA1A-250ENST00000637809 EDIL3O43854 480 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 LAG3P18627 525 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 CIITAP33076 1130 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 CLCN3P51790 818 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 SETQ01105 290 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 PLCB3Q01970 1234 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 APOBRQ0VD83 1088 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 PDE12Q6L8Q7 609 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 CKAP2LQ8IYA6 745 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 SMAP1Q8IYB5 467 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 THNSL1Q8IYQ7 743 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 METTL13Q8N6R0 699 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 PRSS33Q8NF86 280 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 MRPS27Q92552 414 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 LENG9Q96B70 501 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 TMEM117Q9H0C3 514 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 PCDHA10Q9Y5I2 948 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
CACNA1A-250ENST00000637809 FSD2A1L4K1 749 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 ZNF862O60290 1169 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 PSAPP07602 524 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 CPA1P15085 419 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 METAP2P50579 478 aaKnown RBP eCLIP13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 KRT32Q14532 448 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 PRR16Q569H4 304 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 PLPP4Q5VZY2 271 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 SYCE2Q6PIF2 218 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 TRMT1LQ7Z2T5 733 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 REXO1Q8N1G1 1221 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 RASGRP4Q8TDF6 673 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 PBXIP1Q96AQ6 731 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 ASIC4Q96FT7 647 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 RPGRIP1Q96KN7 1286 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 PHOX2BQ99453 314 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 GABBR1Q9UBS5 961 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 MYO15AQ9UKN7 3530 aa13.75□□□□□ -0.21
CACNA1A-250ENST00000637809 NID2Q14112 1375 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 CFAP54Q96N23 3096 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 HIDE1A8MVS5 230 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 MAGEB2O15479 319 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 HMGB1P09429 215 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 PBX3P40426 434 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 NLRP11P59045 1033 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 MCTP2Q6DN12 878 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 EFCAB12Q6NXP0 572 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 ANKRD54Q6NXT1 300 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 KCNT2Q6UVM3 1135 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 ECHDC2Q86YB7 292 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 LRRC71Q8N4P6 559 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 KCNB2Q92953 911 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 TCF25Q9BQ70 676 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 C6orf50Q9HD87 102 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 CEP131Q9UPN4 1083 aa13.74□□□□□ -0.21
CACNA1A-250ENST00000637809 CCDC196A0A1B0GTZ2 297 aa13.73□□□□□ -0.21
CACNA1A-250ENST00000637809 HOXA2O43364 376 aa13.73□□□□□ -0.21
CACNA1A-250ENST00000637809 PRPF3O43395 683 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-250ENST00000637809 EIF4BP23588 611 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-250ENST00000637809 TECP42680 631 aa13.73□□□□□ -0.21
CACNA1A-250ENST00000637809 GPC3P51654 580 aa13.73□□□□□ -0.21
CACNA1A-250ENST00000637809 SIGLEC14Q08ET2 396 aa13.73□□□□□ -0.21
CACNA1A-250ENST00000637809 UGCGQ16739 394 aa13.73□□□□□ -0.21
CACNA1A-250ENST00000637809 CLLU1OSQ5K130 101 aa13.73□□□□□ -0.21
CACNA1A-250ENST00000637809 ZNF598Q86UK7 904 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms