RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 PGBD1Q96JS3 809 aa10□□□□□ -0.81
CLN8-214ENST00000637594 ADAMTS10Q9H324 1103 aa10□□□□□ -0.81
CLN8-214ENST00000637594 ATP6V0A4Q9HBG4 840 aa10□□□□□ -0.81
CLN8-214ENST00000637594 ANO2Q9NQ90 1003 aa10□□□□□ -0.81
CLN8-214ENST00000637594 TMEM260Q9NX78 707 aa10□□□□□ -0.81
CLN8-214ENST00000637594 USP15Q9Y4E8 981 aaPredicted RBP10□□□□□ -0.81
CLN8-214ENST00000637594 PCDHA10Q9Y5I2 948 aa10□□□□□ -0.81
CLN8-214ENST00000637594 ATG2AQ2TAZ0 1938 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 TMEM221A6NGB7 291 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 M0R296 226 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 HOXA2O43364 376 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 PRPF3O43395 683 aaKnown RBP9.99□□□□□ -0.81
CLN8-214ENST00000637594 PPFIA3O75145 1194 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 PSAPP07602 524 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 LAG3P18627 525 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 SETQ01105 290 aaPredicted RBP9.99□□□□□ -0.81
CLN8-214ENST00000637594 ADCK5Q3MIX3 580 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 LRRC55Q6ZSA7 311 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 FAM228AQ86W67 206 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 RASEFQ8IZ41 740 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 VN1R2Q8NFZ6 395 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 MICAL1Q8TDZ2 1067 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 MRPS27Q92552 414 aaKnown RBP9.99□□□□□ -0.81
CLN8-214ENST00000637594 PBXIP1Q96AQ6 731 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 CASD1Q96PB1 797 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 ZNF577Q9BSK1 485 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 TMEM117Q9H0C3 514 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 NGRNQ9NPE2 291 aaKnown RBP9.99□□□□□ -0.81
CLN8-214ENST00000637594 PUF60Q9UHX1 559 aaKnown RBP9.99□□□□□ -0.81
CLN8-214ENST00000637594 BARX2Q9UMQ3 279 aaPredicted RBP9.99□□□□□ -0.81
CLN8-214ENST00000637594 CEP131Q9UPN4 1083 aa9.99□□□□□ -0.81
CLN8-214ENST00000637594 PER2O15055 1255 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 EOMESO95936 686 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 HOXB8P17481 243 aaPredicted RBP9.98□□□□□ -0.81
CLN8-214ENST00000637594 TMOD1P28289 359 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 GNA11P29992 359 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 ADD1P35611 737 aaKnown RBP9.98□□□□□ -0.81
CLN8-214ENST00000637594 USP11P51784 963 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 NUBP1P53384 320 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 CDC42EP1Q00587 391 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 SIGLEC14Q08ET2 396 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 KIZQ2M2Z5 673 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 JAKMIP3Q5VZ66 844 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 THNSL1Q8IYQ7 743 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 CCDC12Q8WUD4 166 aaPredicted RBP9.98□□□□□ -0.81
CLN8-214ENST00000637594 RSPH1Q8WYR4 309 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 ASIC4Q96FT7 647 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 FAM167AQ96KS9 214 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 OSMRQ99650 979 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 TRAIPQ9BWF2 469 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 C6orf50Q9HD87 102 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 NRBP2Q9NSY0 501 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 RNF19AQ9NV58 838 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 GINS2Q9Y248 185 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 PCDHGC5Q9Y5F6 944 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 C5orf42Q9H799 3197 aa9.98□□□□□ -0.81
CLN8-214ENST00000637594 MUC6Q6W4X9 2439 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 A0A0U1RQF3 1178 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 KLF18A0A0U1RQI7 1052 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 GOLGA8AA7E2F4 631 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 GOLGA8BA8MQT2 603 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 DDX39AO00148 427 aaKnown RBP9.97□□□□□ -0.81
CLN8-214ENST00000637594 ADAMTS3O15072 1205 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 EDIL3O43854 480 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 VTNP04004 478 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 SRGAP2BP0DMP2 458 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 FGFR1P11362 822 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 ZSCAN20P17040 1043 aaPredicted RBP9.97□□□□□ -0.81
CLN8-214ENST00000637594 EIF4BP23588 611 aaKnown RBP9.97□□□□□ -0.81
CLN8-214ENST00000637594 PPM1AP35813 382 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 NLRP11P59045 1033 aaKnown RBP9.97□□□□□ -0.81
CLN8-214ENST00000637594 KRT17Q04695 432 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 SPOUT1Q5T280 376 aaKnown RBP9.97□□□□□ -0.81
CLN8-214ENST00000637594 IER5LQ5T953 404 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 EFCAB12Q6NXP0 572 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 ANKRD54Q6NXT1 300 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 SYCE2Q6PIF2 218 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 KCNT2Q6UVM3 1135 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 ZNF598Q86UK7 904 aaKnown RBP9.97□□□□□ -0.81
CLN8-214ENST00000637594 ECHDC2Q86YB7 292 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 CKAP2LQ8IYA6 745 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 FBXL6Q8N531 539 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 METTL13Q8N6R0 699 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 MRPL43Q8N983 215 aaKnown RBP9.97□□□□□ -0.81
CLN8-214ENST00000637594 BICD2Q8TD16 824 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 LENG9Q96B70 501 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 RIT2Q99578 217 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 AGXT2Q9BYV1 514 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 CHST12Q9NRB3 414 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 GABBR1Q9UBS5 961 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 NID2Q14112 1375 aa9.97□□□□□ -0.81
CLN8-214ENST00000637594 CARNS1A5YM72 827 aa9.96□□□□□ -0.82
CLN8-214ENST00000637594 WDR64B1ANS9 1081 aa9.96□□□□□ -0.82
CLN8-214ENST00000637594 ZNF862O60290 1169 aa9.96□□□□□ -0.82
CLN8-214ENST00000637594 DARSP14868 501 aaKnown RBP9.96□□□□□ -0.82
CLN8-214ENST00000637594 METAP2P50579 478 aaKnown RBP eCLIP9.96□□□□□ -0.82
CLN8-214ENST00000637594 PTPN5P54829 565 aa9.96□□□□□ -0.82
CLN8-214ENST00000637594 EVCP57679 992 aa9.96□□□□□ -0.82
CLN8-214ENST00000637594 TARBP2Q15633 366 aaKnown RBP9.96□□□□□ -0.82
CLN8-214ENST00000637594 NTRK3Q16288 839 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms