RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 IBSPP21815 317 aaPredicted RBP20.88■□□□□ 0.93
CLN6-220ENST00000637450 NLRP5P59047 1200 aa20.88■□□□□ 0.93
CLN6-220ENST00000637450 FAM102BQ5T8I3 360 aa20.88■□□□□ 0.93
CLN6-220ENST00000637450 FAM228AQ86W67 206 aa20.88■□□□□ 0.93
CLN6-220ENST00000637450 LINC01465Q8N7H1 131 aa20.88■□□□□ 0.93
CLN6-220ENST00000637450 POF1BQ8WVV4 589 aa20.88■□□□□ 0.93
CLN6-220ENST00000637450 RIT2Q99578 217 aa20.88■□□□□ 0.93
CLN6-220ENST00000637450 NRBP2Q9NSY0 501 aa20.88■□□□□ 0.93
CLN6-220ENST00000637450 FAM86C2PA6NEL3 165 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 C19orf67A6NJJ6 358 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 TBKBP1A7MCY6 615 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 ZNF862O60290 1169 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 IRS1P35568 1242 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 CLCN3P51790 818 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 ZP2Q05996 745 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 DSC3Q14574 896 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 SMAD2Q15796 467 aaKnown RBP20.87■□□□□ 0.93
CLN6-220ENST00000637450 EFCAB12Q6NXP0 572 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 ADHFE1Q8IWW8 467 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 SLC5A5Q92911 643 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 PPP2R3CQ969Q6 453 aa20.87■□□□□ 0.93
CLN6-220ENST00000637450 LINC01565O15544 149 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 OATP04181 439 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 ALADP13716 330 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 TMOD1P28289 359 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 SSRP1Q08945 709 aaKnown RBP20.86■□□□□ 0.93
CLN6-220ENST00000637450 CLUL1Q15846 466 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 TRIM22Q8IYM9 498 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 ZNF710Q8N1W2 664 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 TBCKQ8TEA7 893 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 ZNF274Q96GC6 653 aaPredicted RBP20.86■□□□□ 0.93
CLN6-220ENST00000637450 ADAMTS10Q9H324 1103 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 ELAC1Q9H777 363 aaKnown RBP20.86■□□□□ 0.93
CLN6-220ENST00000637450 TMEM161AQ9NX61 479 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 PCDHA4Q9UN74 947 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 ARIH1Q9Y4X5 557 aaPredicted RBP20.86■□□□□ 0.93
CLN6-220ENST00000637450 PCDHB12Q9Y5F1 795 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 CYP46A1Q9Y6A2 500 aa20.86■□□□□ 0.93
CLN6-220ENST00000637450 MBTPS2O43462 519 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 GAS7O60861 476 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 TBX10O75333 385 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 SFNP31947 248 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 PLA2G5P39877 138 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 NLRP11P59045 1033 aaKnown RBP20.85■□□□□ 0.93
CLN6-220ENST00000637450 PRKCEQ02156 737 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 Q4G0T1 1027 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 ADGRD2Q7Z7M1 963 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 GJA10Q969M2 543 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 MAP7D2Q96T17 732 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 TEKT3Q9BXF9 490 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 C22orf23Q9BZE7 217 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 TM6SF1Q9BZW5 370 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 UNC45AQ9H3U1 944 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 ATP6V0A4Q9HBG4 840 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 AAASQ9NRG9 546 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 TYW1Q9NV66 732 aaKnown RBP20.85■□□□□ 0.93
CLN6-220ENST00000637450 AKT3Q9Y243 479 aa20.85■□□□□ 0.93
CLN6-220ENST00000637450 CYP3A7-CYP3A51PA0A087WV96 503 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 M0R2N6 131 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 PSMD10O75832 226 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 DEXIO95424 95 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 CYP3A7P24462 503 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 JAK3P52333 1124 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 UBE3AQ05086 875 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 SMAD4Q13485 552 aaKnown RBP20.84■□□□□ 0.93
CLN6-220ENST00000637450 UGCGQ16739 394 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 SPOUT1Q5T280 376 aaKnown RBP20.84■□□□□ 0.93
CLN6-220ENST00000637450 LRCH2Q5VUJ6 765 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 LRRC71Q8N4P6 559 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 EFHBQ8N7U6 833 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 FAM122AQ96E09 287 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 CD207Q9UJ71 328 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 LOXHD1Q8IVV2 1947 aa20.84■□□□□ 0.93
CLN6-220ENST00000637450 C5orf42Q9H799 3197 aa20.83■□□□□ 0.93
CLN6-220ENST00000637450 CPLX1O14810 134 aa20.83■□□□□ 0.93
CLN6-220ENST00000637450 CHMP2AO43633 222 aa20.83■□□□□ 0.93
CLN6-220ENST00000637450 FGFR1P11362 822 aa20.83■□□□□ 0.93
CLN6-220ENST00000637450 EIF4BP23588 611 aaKnown RBP20.83■□□□□ 0.93
CLN6-220ENST00000637450 BLIDQ8IZY5 108 aa20.83■□□□□ 0.93
CLN6-220ENST00000637450 RDM1Q8NG50 284 aa20.83■□□□□ 0.93
CLN6-220ENST00000637450 MSLNLQ96KJ4 702 aa20.83■□□□□ 0.93
CLN6-220ENST00000637450 LARP6Q9BRS8 491 aaKnown RBP20.83■□□□□ 0.93
CLN6-220ENST00000637450 CWH43Q9H720 699 aa20.83■□□□□ 0.93
CLN6-220ENST00000637450 CLEC1BQ9P126 229 aa20.83■□□□□ 0.93
CLN6-220ENST00000637450 HCN4Q9Y3Q4 1203 aa20.83■□□□□ 0.93
CLN6-220ENST00000637450 EVPLQ92817 2033 aa20.83■□□□□ 0.92
CLN6-220ENST00000637450 PRR33A8MZF0 331 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 DCXO43602 365 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 EYA4O95677 639 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 NRIP1P48552 1158 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 NDUFV1P49821 464 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 TARBP2Q15633 366 aaKnown RBP20.82■□□□□ 0.92
CLN6-220ENST00000637450 NPY5RQ15761 445 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 B3GNT9Q6UX72 402 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 FAM177A1Q8N128 213 aaPredicted RBP20.82■□□□□ 0.92
CLN6-220ENST00000637450 COLGALT1Q8NBJ5 622 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 DAGLBQ8NCG7 672 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 HCSTQ9UBK5 93 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 PCDHGC5Q9Y5F6 944 aa20.82■□□□□ 0.92
CLN6-220ENST00000637450 ATG2AQ2TAZ0 1938 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms