RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CCDC151A5D8V7 595 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 NR3C2P08235 984 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 NMT1P30419 496 aaKnown RBP12.63□□□□□ -0.39
CLN6-217ENST00000636964 ERVK-24P63145 666 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 SP4Q02446 784 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 CCDC40Q4G0X9 1142 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 VWA3BQ502W6 1294 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 DPY19L2Q6NUT2 758 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 C1orf186Q6ZWK4 172 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 NACC1Q96RE7 527 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 KCTD10Q9H3F6 313 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 HOXC10Q9NYD6 342 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 ADAMTS5Q9UNA0 930 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 FAM13AO94988 1023 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 FDX1P10109 184 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 BCRP11274 1271 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 HOXD13P35453 343 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 GHRHRQ02643 423 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 ADAM9Q13443 819 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 ZC2HC1CQ53FD0 456 aaPredicted RBP12.62□□□□□ -0.39
CLN6-217ENST00000636964 KAT2BQ92831 832 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 TEX13BQ9BXU2 312 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 LUC7L2Q9Y383 392 aaKnown RBP12.62□□□□□ -0.39
CLN6-217ENST00000636964 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 RLFQ13129 1914 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 A0A1W2PQC6 194 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 FGFR1OPO95684 399 aaKnown RBP12.62□□□□□ -0.39
CLN6-217ENST00000636964 MYBPC2Q14324 1141 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 FKBP15Q5T1M5 1219 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 ACRBPQ8NEB7 543 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 SMCR8Q8TEV9 937 aaPredicted RBP12.62□□□□□ -0.39
CLN6-217ENST00000636964 A1CFQ9NQ94 594 aaKnown RBP12.62□□□□□ -0.39
CLN6-217ENST00000636964 FAM207AQ9NSI2 230 aaPredicted RBP12.62□□□□□ -0.39
CLN6-217ENST00000636964 L1RE1Q9UN81 338 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 ZSCAN12O43309 604 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 SUDS3Q9H7L9 328 aaPredicted RBP12.62□□□□□ -0.39
CLN6-217ENST00000636964 MMRN2Q9H8L6 949 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 LZTFL1Q9NQ48 299 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 IRAK4Q9NWZ3 460 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 MAP3K20Q9NYL2 800 aaKnown RBP12.62□□□□□ -0.39
CLN6-217ENST00000636964 TELO2Q9Y4R8 837 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 COL4A3BPQ9Y5P4 624 aa12.62□□□□□ -0.39
CLN6-217ENST00000636964 PARP14Q460N5 1801 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 ARHGEF35A5YM69 484 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 CLIC2O15247 247 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 MAN2A1Q16706 1144 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 LEKR1Q6ZMV7 388 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 ABCB6Q9NP58 842 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 CYP39A1Q9NYL5 469 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 EPHB6O15197 1021 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 IVLP07476 585 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 NR2F2P24468 414 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 EPHX2P34913 555 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 ZRSR2Q15696 482 aaKnown RBP12.61□□□□□ -0.39
CLN6-217ENST00000636964 UGCGQ16739 394 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 KNOP1Q1ED39 458 aaKnown RBP12.61□□□□□ -0.39
CLN6-217ENST00000636964 VSIG10LQ86VR7 867 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 GOLGA6L1Q8N7Z2 621 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 GOLGA1Q92805 767 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 CDCA5Q96FF9 252 aa12.61□□□□□ -0.39
CLN6-217ENST00000636964 CCNE2O96020 404 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 CPP00450 1065 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 P4HBP07237 508 aaKnown RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 IREB2P48200 963 aaKnown RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 CNTN2Q02246 1040 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 FSTL1Q12841 308 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 TRIM14Q14142 442 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 GPR162Q16538 588 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 NIPA1Q7RTP0 329 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 OR8K1Q8NGG5 319 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 CRACR2AQ9BSW2 395 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 PAGR1Q9BTK6 254 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 ACAD9Q9H845 621 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 TCEAL9Q9UHQ7 104 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 ADGRG1Q9Y653 693 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 TPD52L2O43399 206 aaKnown RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 PHACTR2O75167 634 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 CCND2P30279 289 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 KCTD17Q8N5Z5 321 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 HNRNPLLQ8WVV9 542 aaKnown RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 R3HDMLQ9H3Y0 253 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 BTBD7Q9P203 1132 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 RAB21Q9UL25 225 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 CAPN11Q9UMQ6 739 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 FRMPD4Q14CM0 1322 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 KIF3CO14782 793 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 CCP110O43303 1012 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 RGS20O76081 388 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 ABL1P00519 1130 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 GSCP56915 257 aaPredicted RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 BRD3Q15059 726 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 EPM2AIP1Q7L775 607 aaPredicted RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 SUGP1Q8IWZ8 645 aaKnown RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 NSUN6Q8TEA1 469 aaKnown RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 CCDC51Q96ER9 411 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 NAA15Q9BXJ9 866 aaKnown RBP12.6□□□□□ -0.39
CLN6-217ENST00000636964 PARVGQ9HBI0 331 aa12.6□□□□□ -0.39
CLN6-217ENST00000636964 TBC1D22BQ9NU19 505 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms