RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 HHIPL2Q6UWX4 724 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 PEX26Q7Z412 305 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 NT5DC3Q86UY8 548 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 NLRP14Q86W24 1093 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 BORCS6Q96GS4 357 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 POLR3CQ9BUI4 534 aaPredicted RBP15.85■□□□□ 0.13
CLN6-215ENST00000636674 GCNT4Q9P109 453 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 SLC12A6Q9UHW9 1150 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 AJAP1Q9UKB5 411 aaPredicted RBP15.85■□□□□ 0.13
CLN6-215ENST00000636674 DAAM1Q9Y4D1 1078 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 NRXN2Q9P2S2 1712 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.85■□□□□ 0.13
CLN6-215ENST00000636674 GAP43P17677 238 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 FNTAP49354 379 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 ZNF844Q08AG5 666 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 PRPF38AQ8NAV1 312 aaKnown RBP15.85■□□□□ 0.13
CLN6-215ENST00000636674 SLC30A5Q8TAD4 765 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 P2RX7Q99572 595 aaKnown RBP15.85■□□□□ 0.13
CLN6-215ENST00000636674 GOLPH3Q9H4A6 298 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 VAV3Q9UKW4 847 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 RBBP6Q7Z6E9 1792 aaKnown RBP15.85■□□□□ 0.13
CLN6-215ENST00000636674 KRIT1O00522 736 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 MPHOSPH10O00566 681 aaKnown RBP15.84■□□□□ 0.13
CLN6-215ENST00000636674 PAEPP09466 180 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 GYS1P13807 737 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 PRR16Q569H4 304 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 DCAF17Q5H9S7 520 aaPredicted RBP15.84■□□□□ 0.13
CLN6-215ENST00000636674 CDC42EP5Q6NZY7 148 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 SP8Q8IXZ3 490 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 CCDC26Q8TAB7 109 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 CCT8L2Q96SF2 557 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 MKNK1Q9BUB5 465 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 NEUROG2Q9H2A3 272 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 DIS3Q9Y2L1 958 aaKnown RBP15.84■□□□□ 0.13
CLN6-215ENST00000636674 EYA4O95677 639 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 STAT1P42224 750 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 POU5F1Q01860 360 aaKnown RBP15.84■□□□□ 0.13
CLN6-215ENST00000636674 SWT1Q5T5J6 900 aaKnown RBP15.84■□□□□ 0.13
CLN6-215ENST00000636674 FMNL3Q8IVF7 1028 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 OTUD6BQ8N6M0 293 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 SYT11Q9BT88 431 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 AMNQ9BXJ7 453 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 DDX47Q9H0S4 455 aaKnown RBP15.84■□□□□ 0.13
CLN6-215ENST00000636674 DNAJC18Q9H819 358 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 FAM114A2Q9NRY5 505 aa15.84■□□□□ 0.13
CLN6-215ENST00000636674 ZMYM2Q9UBW7 1377 aa15.83■□□□□ 0.13
CLN6-215ENST00000636674 UBE4BO95155 1302 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 TBCAO75347 108 aaKnown RBP15.83■□□□□ 0.12
CLN6-215ENST00000636674 GUCY2CP25092 1073 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 CTNNA1P35221 906 aaKnown RBP15.83■□□□□ 0.12
CLN6-215ENST00000636674 USP8P40818 1118 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 DRP2Q13474 957 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 PLCB4Q15147 1175 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 PPP2R5EQ16537 467 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 SLFN13Q68D06 897 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 TMC3Q7Z5M5 1100 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 TEX2Q8IWB9 1127 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 RFFLQ8WZ73 363 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 CEP89Q96ST8 783 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 AP1M1Q9BXS5 423 aa15.83■□□□□ 0.12
CLN6-215ENST00000636674 PPP1R1BQ9UD71 204 aaPredicted RBP15.83■□□□□ 0.12
CLN6-215ENST00000636674 ANKRD31Q8N7Z5 1873 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 TMCO5BA8MYB1 307 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 FAM86B1E9PN63 330 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 MYO1FO00160 1098 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 MEIS1O00470 390 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 TGFB1I1O43294 461 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 CYP3A4P08684 503 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 FAM86B2P0C5J1 330 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 TMEM253P0C7T8 217 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 EEF2P13639 858 aaKnown RBP15.82■□□□□ 0.12
CLN6-215ENST00000636674 LMNB1P20700 586 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 CASP4P49662 377 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 TCERG1LQ5VWI1 586 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 APOBEC3HQ6NTF7 200 aaKnown RBP15.82■□□□□ 0.12
CLN6-215ENST00000636674 C6orf89Q6UWU4 347 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 LNX1Q8TBB1 728 aaPredicted RBP15.82■□□□□ 0.12
CLN6-215ENST00000636674 RUSC1Q9BVN2 902 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 LOXHD1Q8IVV2 1947 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 FRMPD4Q14CM0 1322 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 RSPH10B2B2RC85 870 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 F8VZ95 297 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 PPEF1O14829 653 aaPredicted RBP15.82■□□□□ 0.12
CLN6-215ENST00000636674 MSH4O15457 936 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 GCNT3O95395 438 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 RSPH10BP0C881 870 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 SOX5P35711 763 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 GTF2A1P52655 376 aaPredicted RBP15.82■□□□□ 0.12
CLN6-215ENST00000636674 GALCP54803 685 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 HDLBPQ00341 1268 aaKnown RBP15.82■□□□□ 0.12
CLN6-215ENST00000636674 PPATQ06203 517 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 KCNV1Q6PIU1 500 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 DAAM2Q86T65 1068 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 DDX42Q86XP3 938 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLN6-215ENST00000636674 IPO4Q8TEX9 1081 aaKnown RBP15.82■□□□□ 0.12
CLN6-215ENST00000636674 TEKT1Q969V4 418 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 UIMC1Q96RL1 719 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 AMFRQ9UKV5 643 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 RABGAP1Q9Y3P9 1069 aa15.82■□□□□ 0.12
CLN6-215ENST00000636674 SPDYE3A6NKU9 549 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms