RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 LINC01599Q8WXQ3 324 aa12.46□□□□□ -0.41
SRP54-AS1-205ENST00000636540 CELF4Q9BZC1 486 aaKnown RBP12.46□□□□□ -0.41
SRP54-AS1-205ENST00000636540 TTC12Q9H892 705 aaPredicted RBP12.46□□□□□ -0.41
SRP54-AS1-205ENST00000636540 NRBP2Q9NSY0 501 aa12.46□□□□□ -0.41
SRP54-AS1-205ENST00000636540 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.41
SRP54-AS1-205ENST00000636540 SMC3Q9UQE7 1217 aa12.46□□□□□ -0.41
SRP54-AS1-205ENST00000636540 ATG2AQ2TAZ0 1938 aa12.46□□□□□ -0.42
SRP54-AS1-205ENST00000636540 MYO9BQ13459 2157 aa12.46□□□□□ -0.42
SRP54-AS1-205ENST00000636540 IGKV6-21A0A0C4DH24 114 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 DKC1O60832 514 aaKnown RBP eCLIP12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 GPR32O75388 356 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 AMHP03971 560 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 ATP2B1P20020 1258 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 CD52P31358 61 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 TXKP42681 527 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 CYP4A11Q02928 519 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 KIZQ2M2Z5 673 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 C4orf19Q8IY42 314 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 MYOCDQ8IZQ8 938 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 METTL13Q8N6R0 699 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 DYDC2Q96IM9 177 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 MAP7D2Q96T17 732 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 PPP1R16BQ96T49 567 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 EIF2AK1Q9BQI3 630 aaKnown RBP12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 SH2D3AQ9BRG2 576 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 SLC28A3Q9HAS3 691 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 RGL1Q9NZL6 768 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 AKT3Q9Y243 479 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 STXBP5LQ9Y2K9 1186 aa12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 RBM19Q9Y4C8 960 aaKnown RBP12.45□□□□□ -0.42
SRP54-AS1-205ENST00000636540 FNDC1Q4ZHG4 1894 aaPredicted RBP12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 LCHNA4D1U4 455 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 TLL1O43897 1013 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 TOB1P50616 345 aaPredicted RBP12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 PAK2Q13177 524 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 DRP2Q13474 957 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 CTTNQ14247 550 aaKnown RBP12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 GRIN2CQ14957 1233 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 ZNF174Q15697 407 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 EFCAB12Q6NXP0 572 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 MYLIPQ8WY64 445 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 CDX2Q99626 313 aaPredicted RBP12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 OSMRQ99650 979 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 CDHR5Q9HBB8 845 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 ERVK-5Q9HDB9 667 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 CYP26B1Q9NR63 512 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 GINS2Q9Y248 185 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 PPME1Q9Y570 386 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 PCDHB6Q9Y5E3 794 aa12.44□□□□□ -0.42
SRP54-AS1-205ENST00000636540 PRUNE2Q8WUY3 3088 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 H3BQV1 296 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 K7ELQ4 463 aaPredicted RBP12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 MAFO75444 373 aaPredicted RBP12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 LYPLA2O95372 231 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 TMOD1P28289 359 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 YWHABP31946 246 aaKnown RBP12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 GPC3P51654 580 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 CRYBB1P53674 252 aaPredicted RBP12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 NPEPPSP55786 919 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 HTRA4P83105 476 aaPredicted RBP12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 TAP1Q03518 808 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 TMEM266Q2M3C6 531 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 MCTP1Q6DN14 999 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 FAM228AQ86W67 206 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 C4orf32Q8N8J7 132 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 TOP1MTQ969P6 601 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 HSD17B14Q9BPX1 270 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 FTHL17Q9BXU8 183 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 ADAMTS10Q9H324 1103 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 TMX1Q9H3N1 280 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 ZSWIM4Q9H7M6 989 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 RC3H2Q9HBD1 1191 aaKnown RBP12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 PADI3Q9ULW8 664 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 REV3LO60673 3130 aa12.43□□□□□ -0.42
SRP54-AS1-205ENST00000636540 RPS6KA5O75582 802 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 SLITRK3O94933 977 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 RFC5P40937 340 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 NLRP11P59045 1033 aaKnown RBP12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 FAM117BQ6P1L5 589 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 SPRED2Q7Z698 418 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 ZNF710Q8N1W2 664 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 CEP170P1Q96L14 293 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 RAD9AQ99638 391 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 ZBED2Q9BTP6 218 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 TSPYL2Q9H2G4 693 aaPredicted RBP12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 PRDM12Q9H4Q4 367 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 DHX33Q9H6R0 707 aaKnown RBP12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 SUGCTQ9HAC7 445 aa12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 NOC2LQ9Y3T9 749 aaKnown RBP12.42□□□□□ -0.42
SRP54-AS1-205ENST00000636540 EPOPA6NHQ4 379 aa12.41□□□□□ -0.42
SRP54-AS1-205ENST00000636540 LAD1O00515 517 aa12.41□□□□□ -0.42
SRP54-AS1-205ENST00000636540 GAS2O43903 313 aaKnown RBP12.41□□□□□ -0.42
SRP54-AS1-205ENST00000636540 MGEA5O60502 916 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms