RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TMEM109Q9BVC6 243 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 BATF3Q9NR55 127 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 INTS9Q9NV88 658 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 DDX3XO00571 662 aaKnown RBP eCLIP16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 SLC16A3O15427 465 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 TMEM253P0C7T8 217 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 STAT1P42224 750 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 GALCP54803 685 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 BTNL9Q6UXG8 535 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 TRPM8Q7Z2W7 1104 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 NYXQ9GZU5 481 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 EBF2Q9HAK2 575 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 GOPCQ9HD26 462 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 DOT1LQ8TEK3 1739 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 PNMA6FA0A0J9YX94 578 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 BUB1BO60566 1050 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 HSPA6P17066 643 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 CLK2P49760 499 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 MAB21L3Q8N8X9 362 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 TRIM31Q9BZY9 425 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 SPDYE3A6NKU9 549 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 PLCG2P16885 1265 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 KIAA1755Q5JYT7 1200 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 TXNRD3Q86VQ6 643 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 EPB41L4BQ9H329 900 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 ZHX3Q9H4I2 956 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 TRPC6Q9Y210 931 aa16.06■□□□□ 0.16
CACNA1A-220ENST00000635988 IRS2Q9Y4H2 1338 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 DDX3YO15523 660 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 IBSPP21815 317 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 KLRC3Q07444 240 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 CTNNBL1Q8WYA6 563 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 DHX36Q9H2U1 1008 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 SIX2Q9NPC8 291 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 MTRF1LQ9UGC7 380 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 AFF2P51816 1311 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 NPHP3-ACAD11A0A0J9YXS1 232 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 PPATQ06203 517 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 PLS1Q14651 629 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 DCAF17Q5H9S7 520 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 TAOK1Q7L7X3 1001 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 LRRC34Q8IZ02 419 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 SLC30A5Q8TAD4 765 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 SLC35G2Q8TBE7 412 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 ADAM7Q9H2U9 754 aa16.05■□□□□ 0.16
CACNA1A-220ENST00000635988 POTEB3A0JP26 581 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 POTECB2RU33 542 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 SHBGP04278 402 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 PDE6CP51160 858 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 SLC12A3P55017 1021 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 MAPK7Q13164 816 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 PRPF4BQ13523 1007 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 ZNF268Q14587 947 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 TCERG1LQ5VWI1 586 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 POTEBQ6S5H4 581 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 JAMLQ86YT9 394 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 GBP7Q8N8V2 638 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 CDCA7Q9BWT1 371 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 RTFDC1Q9BY42 306 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 GLT8D2Q9H1C3 349 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 TYW1Q9NV66 732 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 GCNT4Q9P109 453 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 FRMPD2Q68DX3 1309 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 TLDC2A0PJX2 215 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 PODXLO00592 558 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 KIAA0391O15091 583 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 VIMP08670 466 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 SNHG28P0DPA3 235 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 ZNF131P52739 623 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 PLTPP55058 493 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 EPM2AIP1Q7L775 607 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 DNAAF5Q86Y56 855 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 TCP11Q8WWU5 503 aa16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 ELAC2Q9BQ52 826 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 TRIM6Q9C030 488 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-220ENST00000635988 CLTAP09496 248 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 CHRNA3P32297 505 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 UBE2SQ16763 222 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 ARSHQ5FYA8 562 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 PNMA8AQ86V59 439 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 SLFN12Q8IYM2 578 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 TBC1D22AQ8WUA7 517 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 SLC35C1Q96A29 364 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 RNF25Q96BH1 459 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 TBC1D31Q96DN5 1066 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 AZI2Q9H6S1 392 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 LRRC4CQ9HCJ2 640 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 PPP1R9AQ9ULJ8 1098 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 NR2E1Q9Y466 385 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 PLIN4Q96Q06 1357 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 EVI5O60447 810 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 AKAP3O75969 853 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 MYCNP04198 464 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 SOX5P35711 763 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 BTDP43251 543 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms