RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 CCDC40Q4G0X9 1142 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 FASTKD5Q7L8L6 764 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 ATRIPQ8WXE1 791 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 TIPINQ9BVW5 301 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 ST6GALNAC4Q9H4F1 302 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 JPH1Q9HDC5 661 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 PDLIM7Q9NR12 457 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 SLC9A2Q9UBY0 812 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 REXO2Q9Y3B8 237 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 DNAJC25-GNG10A0A024R161 153 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 SLC16A3O15427 465 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 NPEPPSP55786 919 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 ACTR2P61160 394 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 UTP14CQ5TAP6 766 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 KSR1Q8IVT5 923 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 CCDC60Q8IWA6 550 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 ZNF526Q8TF50 670 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 SH2D3AQ9BRG2 576 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 EDEM3Q9BZQ6 932 aa13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 LARSQ9P2J5 1176 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.78□□□□□ -0.2
CACNA1A-219ENST00000635917 IGSF9BQ9UPX0 1349 aa13.77□□□□□ -0.2
CACNA1A-219ENST00000635917 SOCS7O14512 581 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 USO1O60763 962 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 SLC25A27O95847 323 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 PLS3P13797 630 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 PLA2G4FQ68DD2 849 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 SYT10Q6XYQ8 523 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 NCAPG2Q86XI2 1143 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 SLC9A9Q8IVB4 645 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 KIF18AQ8NI77 898 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 PAGR1Q9BTK6 254 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 MKNK1Q9BUB5 465 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 L2HGDHQ9H9P8 463 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 PCDHB13Q9Y5F0 798 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 EPN1Q9Y6I3 576 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 PHLPP2Q6ZVD8 1323 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 SYNGAP1Q96PV0 1343 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 PLXNA1Q9UIW2 1896 aa13.77□□□□□ -0.21
CACNA1A-219ENST00000635917 IGKV6D-21A0A0A0MT36 114 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 CLIC2O15247 247 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 CTIFO43310 598 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 NDUFA10O95299 355 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 RPL13P26373 211 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 GTF2BQ00403 316 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 KCNH2Q12809 1159 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 ACRBPQ8NEB7 543 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 SLC35C1Q96A29 364 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 AGPAT3Q9NRZ7 376 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 FAM207AQ9NSI2 230 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 GABBR1Q9UBS5 961 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 ARMCX3Q9UH62 379 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 POTEB2H3BUK9 544 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 PSAPP07602 524 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 ATP4AP20648 1035 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 ARHGAP25P42331 645 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 NCKAP1LP55160 1127 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 PPP2R3AQ06190 1150 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 SNAPC2Q13487 334 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 ALCAMQ13740 583 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 XKR9Q5GH70 373 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 MAP1SQ66K74 1059 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 SWSAP1Q6NVH7 229 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 ATP6V0A1Q93050 837 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 GBP3Q9H0R5 595 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 MMRN2Q9H8L6 949 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 METTL14Q9HCE5 456 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 GPRC5CQ9NQ84 441 aa13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 MAFBQ9Y5Q3 323 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-219ENST00000635917 ABL1P00519 1130 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 SUPT20HL2P0C7V6 817 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 COPB2P35606 906 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 MCCD1P59942 119 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 MYBPC2Q14324 1141 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 STXBP4Q6ZWJ1 553 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 MAEAQ7L5Y9 396 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 C12orf56Q8IXR9 622 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 MORC4Q8TE76 937 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 ZNF592Q92610 1267 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 DRC1Q96MC2 740 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 WDR24Q96S15 920 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 CEP89Q96ST8 783 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 NTPCRQ9BSD7 190 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 XPNPEP1Q9NQW7 623 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 TCEAL9Q9UHQ7 104 aa13.75□□□□□ -0.21
CACNA1A-219ENST00000635917 PLXNB2O15031 1838 aa13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 SIP14410 1827 aa13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 DKC1O60832 514 aaKnown RBP eCLIP13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 FARP2O94887 1054 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 UBA1P22314 1058 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 ZNF662Q6ZS27 426 aa13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 CYFIP1Q7L576 1253 aa13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 CCDC170Q8IYT3 715 aa13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 ZNF397Q8NF99 534 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 SLC10A4Q96EP9 437 aa13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 IRX2Q9BZI1 471 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 GANQ9H2C0 597 aa13.74□□□□□ -0.21
CACNA1A-219ENST00000635917 CEP72Q9P209 647 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms