RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 MBTPS1Q14703 1052 aa17.28■□□□□ 0.36
CLN6-211ENST00000635754 SLC39A14Q15043 492 aa17.28■□□□□ 0.36
CLN6-211ENST00000635754 STK38Q15208 465 aa17.28■□□□□ 0.36
CLN6-211ENST00000635754 FOXD4L6Q3SYB3 417 aaPredicted RBP17.28■□□□□ 0.36
CLN6-211ENST00000635754 FOXD4L3Q6VB84 417 aaPredicted RBP17.28■□□□□ 0.36
CLN6-211ENST00000635754 LINC01465Q8N7H1 131 aa17.28■□□□□ 0.36
CLN6-211ENST00000635754 AKT3Q9Y243 479 aa17.28■□□□□ 0.36
CLN6-211ENST00000635754 TRPV2Q9Y5S1 764 aa17.28■□□□□ 0.36
CLN6-211ENST00000635754 CDY2AQ9Y6F7 541 aa17.28■□□□□ 0.36
CLN6-211ENST00000635754 MORC2Q9Y6X9 1032 aaPredicted RBP17.28■□□□□ 0.36
CLN6-211ENST00000635754 RANBP2P49792 3224 aaKnown RBP17.27■□□□□ 0.36
CLN6-211ENST00000635754 TET1Q8NFU7 2136 aa17.27■□□□□ 0.36
CLN6-211ENST00000635754 IGKV6-21A0A0C4DH24 114 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 FGBP02675 491 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 CHRNA1P02708 482 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 CXCL10P02778 98 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 ACTN1P12814 892 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 MARCKSP29966 332 aaPredicted RBP17.27■□□□□ 0.35
CLN6-211ENST00000635754 RARRES1P49788 294 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 TMEM240Q5SV17 173 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 ATL3Q6DD88 541 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 ZNF365Q70YC5 407 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 C16orf59Q7L2K0 433 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 ZNF710Q8N1W2 664 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 ZNF579Q8NAF0 562 aaKnown RBP17.27■□□□□ 0.35
CLN6-211ENST00000635754 CDK5RAP3Q96JB5 506 aa17.27■□□□□ 0.35
CLN6-211ENST00000635754 CELF4Q9BZC1 486 aaKnown RBP17.27■□□□□ 0.35
CLN6-211ENST00000635754 DHX33Q9H6R0 707 aaKnown RBP17.27■□□□□ 0.35
CLN6-211ENST00000635754 DDX19AQ9NUU7 478 aaKnown RBP17.27■□□□□ 0.35
CLN6-211ENST00000635754 TFIP11Q9UBB9 837 aaKnown RBP17.27■□□□□ 0.35
CLN6-211ENST00000635754 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.35
CLN6-211ENST00000635754 GAS2O43903 313 aaKnown RBP17.26■□□□□ 0.35
CLN6-211ENST00000635754 YEATS4O95619 227 aa17.26■□□□□ 0.35
CLN6-211ENST00000635754 VTNP04004 478 aa17.26■□□□□ 0.35
CLN6-211ENST00000635754 UBA7P41226 1012 aa17.26■□□□□ 0.35
CLN6-211ENST00000635754 GPNMBQ14956 572 aa17.26■□□□□ 0.35
CLN6-211ENST00000635754 EMC2Q15006 297 aa17.26■□□□□ 0.35
CLN6-211ENST00000635754 SHHQ15465 462 aa17.26■□□□□ 0.35
CLN6-211ENST00000635754 ZRSR1Q15695 479 aaKnown RBP17.26■□□□□ 0.35
CLN6-211ENST00000635754 C9orf50Q5SZB4 431 aa17.26■□□□□ 0.35
CLN6-211ENST00000635754 RNPC3Q96LT9 517 aaKnown RBP17.26■□□□□ 0.35
CLN6-211ENST00000635754 MMTAG2Q9BU76 263 aaKnown RBP17.26■□□□□ 0.35
CLN6-211ENST00000635754 NT5C3AQ9H0P0 336 aa17.26■□□□□ 0.35
CLN6-211ENST00000635754 MTIF3Q9H2K0 278 aaKnown RBP17.26■□□□□ 0.35
CLN6-211ENST00000635754 FBXO2Q9UK22 296 aaPredicted RBP17.26■□□□□ 0.35
CLN6-211ENST00000635754 KIAA1024Q9UPX6 916 aa17.26■□□□□ 0.35
CLN6-211ENST00000635754 ATP6V1DQ9Y5K8 247 aa17.26■□□□□ 0.35
CLN6-211ENST00000635754 SRPRBQ9Y5M8 271 aaKnown RBP17.26■□□□□ 0.35
CLN6-211ENST00000635754 A0A087WWV3 80 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 SLC26A4O43511 780 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 DGAT1O75907 488 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 GHRP10912 638 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 GRIN1Q05586 938 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 ECM1Q16610 540 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 CNKSR3Q6P9H4 555 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 OTOP2Q7RTS6 562 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 CABP7Q86V35 215 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 KRI1Q8N9T8 703 aaKnown RBP17.25■□□□□ 0.35
CLN6-211ENST00000635754 LINC00301Q8NCQ3 95 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 TCP11Q8WWU5 503 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 VWCEQ96DN2 955 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 PPP1R16BQ96T49 567 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 MTRQ99707 1265 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 ATP6V0A4Q9HBG4 840 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 BMP2KQ9NSY1 1161 aaPredicted RBP17.25■□□□□ 0.35
CLN6-211ENST00000635754 CFAP45Q9UL16 551 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 DNM3Q9UQ16 869 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 GINS2Q9Y248 185 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 ZDHHC9Q9Y397 364 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 SQORQ9Y6N5 450 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 TRIOBPQ9H2D6 2365 aa17.25■□□□□ 0.35
CLN6-211ENST00000635754 ARHGEF35A5YM69 484 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 SPTLC2O15270 562 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 NLRP11P59045 1033 aaKnown RBP17.24■□□□□ 0.35
CLN6-211ENST00000635754 NUCB2P80303 420 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 CDC42EP1Q00587 391 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 DNM1Q05193 864 aaKnown RBP17.24■□□□□ 0.35
CLN6-211ENST00000635754 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
CLN6-211ENST00000635754 KIZQ2M2Z5 673 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 PLEKHG4Q58EX7 1191 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 FBXO47Q5MNV8 452 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 HYIQ5T013 277 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 KCTD17Q8N5Z5 321 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 USP38Q8NB14 1042 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 RASSF8Q8NHQ8 419 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 HERVK_113Q902F9 699 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 SEPT8Q92599 483 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 CALML4Q96GE6 196 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 SCLT1Q96NL6 688 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 CSRNP2Q9H175 543 aa17.24■□□□□ 0.35
CLN6-211ENST00000635754 SUCLA2Q9P2R7 463 aaPredicted RBP17.24■□□□□ 0.35
CLN6-211ENST00000635754 USO1O60763 962 aaKnown RBP17.23■□□□□ 0.35
CLN6-211ENST00000635754 PPP6R2O75170 966 aa17.23■□□□□ 0.35
CLN6-211ENST00000635754 GPC3P51654 580 aa17.23■□□□□ 0.35
CLN6-211ENST00000635754 CRYBB1P53674 252 aaPredicted RBP17.23■□□□□ 0.35
CLN6-211ENST00000635754 DRP2Q13474 957 aa17.23■□□□□ 0.35
CLN6-211ENST00000635754 LPIN1Q14693 890 aa17.23■□□□□ 0.35
CLN6-211ENST00000635754 TSHZ1Q6ZSZ6 1077 aa17.23■□□□□ 0.35
CLN6-211ENST00000635754 DBF4BQ8NFT6 615 aa17.23■□□□□ 0.35
CLN6-211ENST00000635754 KCNG4Q8TDN1 519 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms