RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 VPS72Q15906 364 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 CRY1Q16526 586 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 ARHGAP44Q17R89 818 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 RGL3Q3MIN7 710 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 TBC1D10BQ4KMP7 808 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-208ENST00000635562 FSTL4Q6MZW2 842 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 USP51Q70EK9 711 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 NXPE1Q8N323 547 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 CISD2Q8N5K1 135 aaKnown RBP3.65□□□□□ -1.83
PSPC1-208ENST00000635562 KYQ8NBH2 561 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 OR2W6PQ8NHA6 318 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 PIP4K2CQ8TBX8 421 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 SNRNP27Q8WVK2 155 aaKnown RBP3.65□□□□□ -1.83
PSPC1-208ENST00000635562 DDX11Q96FC9 970 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 KCNJ15Q99712 375 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 SPATA6Q9NWH7 488 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-208ENST00000635562 BTG4Q9NY30 223 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 GOLGA6AQ9NYA3 693 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 FEZ2Q9UHY8 353 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-208ENST00000635562 MCM8Q9UJA3 840 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 ANAPC4Q9UJX5 808 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 PLA2G2DQ9UNK4 145 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 SRPK3Q9UPE1 567 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 ZNF652Q9Y2D9 606 aa3.65□□□□□ -1.83
PSPC1-208ENST00000635562 PTPDC1A2A3K4 754 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 MROH6A6NGR9 719 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 DVL2O14641 736 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 GPR39O43194 453 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 DHX16O60231 1041 aaKnown RBP3.64□□□□□ -1.83
PSPC1-208ENST00000635562 CLASP2O75122 1294 aaKnown RBP3.64□□□□□ -1.83
PSPC1-208ENST00000635562 CYP7B1O75881 506 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 DGKIO75912 1065 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 LDHAP00338 332 aaKnown RBP3.64□□□□□ -1.83
PSPC1-208ENST00000635562 APPP05067 770 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 GNAT1P11488 350 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 COL6A2P12110 1019 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 GDF5P43026 501 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 ID4P47928 161 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 LSSP48449 732 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 SPIRE1Q08AE8 756 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 STRN3Q13033 797 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 STAT4Q14765 748 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 CCDC184Q52MB2 194 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 FIGNQ5HY92 759 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 ARHGAP36Q6ZRI8 547 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 OSTM1Q86WC4 334 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 CREBRFQ8IUR6 639 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 PDILTQ8N807 584 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 PHOSPHO1Q8TCT1 267 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 SEC14L1Q92503 715 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 DLG3Q92796 817 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 C8orf49Q96NF6 230 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 SORCS2Q96PQ0 1159 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 C11orf84Q9BUA3 381 aaPredicted RBP3.64□□□□□ -1.83
PSPC1-208ENST00000635562 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 RSPH9Q9H1X1 276 aaPredicted RBP3.64□□□□□ -1.83
PSPC1-208ENST00000635562 SMOC1Q9H4F8 434 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 IFT22Q9H7X7 185 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 CABP5Q9NP86 173 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 CATSPERZQ9NTU4 200 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 ASH2LQ9UBL3 628 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 APOBEC2Q9Y235 224 aaKnown RBP3.64□□□□□ -1.83
PSPC1-208ENST00000635562 COA3Q9Y2R0 106 aaPredicted RBP3.64□□□□□ -1.83
PSPC1-208ENST00000635562 SH3BP1Q9Y3L3 701 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 TELO2Q9Y4R8 837 aa3.64□□□□□ -1.83
PSPC1-208ENST00000635562 KAT6BQ8WYB5 2073 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 SLC12A8A0AV02 714 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 BICDL2A1A5D9 508 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 ALG1L2C9J202 215 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 K7ESF4 209 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 CYR61O00622 381 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 HGSO14964 777 aaPredicted RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 KIF3BO15066 747 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 TGM5O43548 720 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 TIMM44O43615 452 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 FKBP9O95302 570 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 FAM163BP0C2L3 166 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 CPEP16870 476 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 TACR2P21452 398 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 GNALP38405 381 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 SCNN1BP51168 640 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 HDAC1Q13547 482 aaPredicted RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 ZRSR2Q15696 482 aaKnown RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 BRDTQ58F21 947 aaPredicted RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 CT47A1Q5JQC4 288 aaPredicted RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 ODR4Q5SWX8 454 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 RNF219Q5W0B1 726 aaPredicted RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 STEAP3Q658P3 488 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 CCDC174Q6PII3 467 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 FKBP9P1Q75LS8 142 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 NECAB2Q7Z6G3 386 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 PTRH1Q86Y79 214 aaKnown RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 MIB1Q86YT6 1006 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 MSL3Q8N5Y2 521 aaKnown RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 SAMD3Q8N6K7 520 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 C2orf69Q8N8R5 385 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 SLC16A11Q8NCK7 471 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 TTLL11Q8NHH1 800 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 WDR66Q8TBY9 1149 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 CHTF18Q8WVB6 975 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms