RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 NLRP11P59045 1033 aaKnown RBP17.58■□□□□ 0.4
LINC00339-207ENST00000634712 CYP4A11Q02928 519 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 CTTNQ14247 550 aaKnown RBP17.58■□□□□ 0.4
LINC00339-207ENST00000634712 TARBP2Q15633 366 aaKnown RBP17.58■□□□□ 0.4
LINC00339-207ENST00000634712 C4orf19Q8IY42 314 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 EXOC8Q8IYI6 725 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 CEP170P1Q96L14 293 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 MTMR9Q96QG7 549 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 YME1L1Q96TA2 773 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 OSMRQ99650 979 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 SH2D3AQ9BRG2 576 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 LXNQ9BS40 222 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 CDHR5Q9HBB8 845 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 RGL1Q9NZL6 768 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 MICAL3Q7RTP6 2002 aa17.58■□□□□ 0.4
LINC00339-207ENST00000634712 GPR182O15218 404 aa17.57■□□□□ 0.4
LINC00339-207ENST00000634712 STBD1O95210 358 aa17.57■□□□□ 0.4
LINC00339-207ENST00000634712 CDC42EP1Q00587 391 aa17.57■□□□□ 0.4
LINC00339-207ENST00000634712 SPIRE1Q08AE8 756 aa17.57■□□□□ 0.4
LINC00339-207ENST00000634712 MKRN4PQ13434 485 aaPredicted RBP17.57■□□□□ 0.4
LINC00339-207ENST00000634712 TMEM266Q2M3C6 531 aa17.57■□□□□ 0.4
LINC00339-207ENST00000634712 FAM43BQ6ZT52 329 aaPredicted RBP17.57■□□□□ 0.4
LINC00339-207ENST00000634712 ANO5Q75V66 913 aa17.57■□□□□ 0.4
LINC00339-207ENST00000634712 NEK9Q8TD19 979 aa17.57■□□□□ 0.4
LINC00339-207ENST00000634712 EIF2AK1Q9BQI3 630 aaKnown RBP17.57■□□□□ 0.4
LINC00339-207ENST00000634712 TMEM60Q9H2L4 133 aa17.57■□□□□ 0.4
LINC00339-207ENST00000634712 CERS4Q9HA82 394 aa17.57■□□□□ 0.4
LINC00339-207ENST00000634712 CYP26B1Q9NR63 512 aa17.57■□□□□ 0.4
LINC00339-207ENST00000634712 NOC2LQ9Y3T9 749 aaKnown RBP17.57■□□□□ 0.4
LINC00339-207ENST00000634712 GPR32O75388 356 aa17.56■□□□□ 0.4
LINC00339-207ENST00000634712 OR52Z1P0C646 297 aa17.56■□□□□ 0.4
LINC00339-207ENST00000634712 IGFBP4P22692 258 aa17.56■□□□□ 0.4
LINC00339-207ENST00000634712 YWHABP31946 246 aaKnown RBP17.56■□□□□ 0.4
LINC00339-207ENST00000634712 TAP1Q03518 808 aa17.56■□□□□ 0.4
LINC00339-207ENST00000634712 LARP1BQ659C4 914 aaKnown RBP17.56■□□□□ 0.4
LINC00339-207ENST00000634712 PLA2G4FQ68DD2 849 aa17.56■□□□□ 0.4
LINC00339-207ENST00000634712 NLRP7Q8WX94 980 aa17.56■□□□□ 0.4
LINC00339-207ENST00000634712 SLC7A3Q8WY07 619 aa17.56■□□□□ 0.4
LINC00339-207ENST00000634712 ARNTL2Q8WYA1 636 aa17.56■□□□□ 0.4
LINC00339-207ENST00000634712 PPME1Q9Y570 386 aa17.56■□□□□ 0.4
LINC00339-207ENST00000634712 LCHNA4D1U4 455 aa17.55■□□□□ 0.4
LINC00339-207ENST00000634712 MAFO75444 373 aaPredicted RBP17.55■□□□□ 0.4
LINC00339-207ENST00000634712 SLITRK3O94933 977 aa17.55■□□□□ 0.4
LINC00339-207ENST00000634712 TECP42680 631 aa17.55■□□□□ 0.4
LINC00339-207ENST00000634712 POLGP54098 1239 aaPredicted RBP17.55■□□□□ 0.4
LINC00339-207ENST00000634712 NPEPPSP55786 919 aa17.55■□□□□ 0.4
LINC00339-207ENST00000634712 XKR9Q5GH70 373 aa17.55■□□□□ 0.4
LINC00339-207ENST00000634712 LINC01465Q8N7H1 131 aa17.55■□□□□ 0.4
LINC00339-207ENST00000634712 MAFAQ8NHW3 353 aaPredicted RBP17.55■□□□□ 0.4
LINC00339-207ENST00000634712 CCDC43Q96MW1 224 aaKnown RBP17.55■□□□□ 0.4
LINC00339-207ENST00000634712 SUCLA2Q9P2R7 463 aaPredicted RBP17.55■□□□□ 0.4
LINC00339-207ENST00000634712 ST3GAL5Q9UNP4 418 aa17.55■□□□□ 0.4
LINC00339-207ENST00000634712 LOXHD1Q8IVV2 1947 aa17.55■□□□□ 0.4
LINC00339-207ENST00000634712 DENND3A2RUS2 1198 aa17.54■□□□□ 0.4
LINC00339-207ENST00000634712 IBSPP21815 317 aaPredicted RBP17.54■□□□□ 0.4
LINC00339-207ENST00000634712 RFC5P40937 340 aa17.54■□□□□ 0.4
LINC00339-207ENST00000634712 GPC3P51654 580 aa17.54■□□□□ 0.4
LINC00339-207ENST00000634712 HTRA4P83105 476 aaPredicted RBP17.54■□□□□ 0.4
LINC00339-207ENST00000634712 ERMNQ8TAM6 284 aa17.54■□□□□ 0.4
LINC00339-207ENST00000634712 TMEM40Q8WWA1 233 aa17.54■□□□□ 0.4
LINC00339-207ENST00000634712 ZNF668Q96K58 619 aaPredicted RBP17.54■□□□□ 0.4
LINC00339-207ENST00000634712 TGS1Q96RS0 853 aaKnown RBP17.54■□□□□ 0.4
LINC00339-207ENST00000634712 HSD17B14Q9BPX1 270 aa17.54■□□□□ 0.4
LINC00339-207ENST00000634712 ERVK-5Q9HDB9 667 aa17.54■□□□□ 0.4
LINC00339-207ENST00000634712 RNF216Q9NWF9 866 aaPredicted RBP17.54■□□□□ 0.4
LINC00339-207ENST00000634712 WRAP73Q9P2S5 460 aaPredicted RBP17.54■□□□□ 0.4
LINC00339-207ENST00000634712 LRFN2Q9ULH4 789 aa17.54■□□□□ 0.4
LINC00339-207ENST00000634712 SIP14410 1827 aa17.54■□□□□ 0.4
LINC00339-207ENST00000634712 PTPRSQ13332 1948 aa17.54■□□□□ 0.4
LINC00339-207ENST00000634712 IGKV6-21A0A0C4DH24 114 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 POTEMA6NI47 508 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 STAG3L1P0CL83 205 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 EIF4BP23588 611 aaKnown RBP17.53■□□□□ 0.4
LINC00339-207ENST00000634712 NBR1Q14596 966 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 RTN4RL1Q86UN2 441 aaPredicted RBP17.53■□□□□ 0.4
LINC00339-207ENST00000634712 RHPN2Q8IUC4 686 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 CEP89Q96ST8 783 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 GCOM2Q9BZD3 368 aaPredicted RBP17.53■□□□□ 0.4
LINC00339-207ENST00000634712 TSPYL2Q9H2G4 693 aaPredicted RBP17.53■□□□□ 0.4
LINC00339-207ENST00000634712 ADAMTS10Q9H324 1103 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 LINC01553A4QN01 128 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 GTPBP6O43824 516 aaPredicted RBP17.53■□□□□ 0.4
LINC00339-207ENST00000634712 ARHGEF15O94989 841 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 ZSCAN20P17040 1043 aaPredicted RBP17.53■□□□□ 0.4
LINC00339-207ENST00000634712 DRP2Q13474 957 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 CUL4AQ13619 759 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 RILPL1Q5EBL4 403 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 FAM228AQ86W67 206 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 TCP11Q8WWU5 503 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 ADAM2Q99965 735 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 RAB34Q9BZG1 259 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 INO80BQ9C086 356 aaPredicted RBP17.53■□□□□ 0.4
LINC00339-207ENST00000634712 TMX1Q9H3N1 280 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 C1orf112Q9NSG2 853 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 MTUS1Q9ULD2 1270 aa17.53■□□□□ 0.4
LINC00339-207ENST00000634712 CDH23Q9H251 3354 aa17.52■□□□□ 0.4
LINC00339-207ENST00000634712 RFXAPO00287 272 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 ZBTB39O15060 712 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 GAS2O43903 313 aaKnown RBP17.52■□□□□ 0.39
LINC00339-207ENST00000634712 LYPLA2O95372 231 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms