RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TBKBP1A7MCY6 615 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 MEIS1O00470 390 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 PER2O15055 1255 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 MGEA5O60502 916 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 LARGE1O95461 756 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 CCNE2O96020 404 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 SARSP49591 514 aaKnown RBP17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 SLC26A2P50443 739 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 PKN1Q16512 942 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 HERC4Q5GLZ8 1057 aaPredicted RBP17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 FAM102BQ5T8I3 360 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 SWSAP1Q6NVH7 229 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 PDXDC2PQ6P474 469 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 PLA2G4DQ86XP0 818 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 CKAP2LQ8IYA6 745 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 NECAB1Q8N987 351 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 MFSD14AQ96MC6 490 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 ZNF302Q9NR11 478 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 CLEC1BQ9P126 229 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 BARX2Q9UMQ3 279 aaPredicted RBP17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 KDM3AQ9Y4C1 1321 aa17.61■□□□□ 0.41
SNRNP48-203ENST00000634363 ESYT2A0FGR8 921 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 MRE11P49959 708 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 NHLH1Q02575 133 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 JAKMIP3Q5VZ66 844 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 ABHD15Q6UXT9 468 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 KIAA0319LQ8IZA0 1049 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 ATP8B4Q8TF62 1192 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 TMEM40Q8WWA1 233 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 C6orf50Q9HD87 102 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 ERVK-5Q9HDB9 667 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 AAASQ9NRG9 546 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 VPS54Q9P1Q0 977 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 ST3GAL5Q9UNP4 418 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 STK36Q9NRP7 1315 aa17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 FNDC1Q4ZHG4 1894 aaPredicted RBP17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
SNRNP48-203ENST00000634363 IGKV6D-21A0A0A0MT36 114 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 GPR182O15218 404 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 EYA4O95677 639 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 GNA11P29992 359 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 SREBF1P36956 1147 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 KIZQ2M2Z5 673 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 ODR4Q5SWX8 454 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 MIS18BP1Q6P0N0 1132 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 SLC24A5Q71RS6 500 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 CCDC60Q8IWA6 550 aaPredicted RBP17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 THNSL1Q8IYQ7 743 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 METTL13Q8N6R0 699 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 SMRP1Q8NCR6 262 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 EDAQ92838 391 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 ZSCAN31Q96LW9 406 aaPredicted RBP17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 ZMYND12Q9H0C1 365 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 SH3GLB2Q9NR46 395 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 SH2B1Q9NRF2 756 aaPredicted RBP17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 RGS18Q9NS28 235 aa17.59■□□□□ 0.41
SNRNP48-203ENST00000634363 FAM86B1E9PN63 330 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 FGF18O76093 207 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 GLP2RO95838 553 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 FAM86B2P0C5J1 330 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 XBP1P17861 261 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 NLRP5P59047 1200 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 RBM10P98175 930 aaKnown RBP17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 COASYQ13057 564 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 AP3B2Q13367 1082 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 ZNF484Q5JVG2 852 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 REXO1Q8N1G1 1221 aaKnown RBP17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 BICD2Q8TD16 824 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 WASF1Q92558 559 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 RPGRIP1Q96KN7 1286 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 OSMRQ99650 979 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 KCNH6Q9H252 994 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 TLR9Q9NR96 1032 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 C1orf112Q9NSG2 853 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 TYW1Q9NV66 732 aaKnown RBP17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 HCSTQ9UBK5 93 aa17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 USP15Q9Y4E8 981 aaPredicted RBP17.58■□□□□ 0.4
SNRNP48-203ENST00000634363 C5orf42Q9H799 3197 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 IPO5O00410 1097 aaKnown RBP17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 VTNP04004 478 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 FGFR1P11362 822 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 ATP4AP20648 1035 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 CLK2P49760 499 aaKnown RBP17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 ERVFC1P60507 584 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 MCTP2Q6DN12 878 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 NIPA1Q7RTP0 329 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 PBXIP1Q96AQ6 731 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 ZNF577Q9BSK1 485 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 ATP6V0A4Q9HBG4 840 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 ORC3Q9UBD5 711 aaPredicted RBP17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 TCEAL9Q9UHQ7 104 aa17.57■□□□□ 0.4
SNRNP48-203ENST00000634363 COL1A2P08123 1366 aa17.56■□□□□ 0.4
SNRNP48-203ENST00000634363 ZBTB42B2RXF5 422 aa17.56■□□□□ 0.4
SNRNP48-203ENST00000634363 C9IYK1 514 aa17.56■□□□□ 0.4
SNRNP48-203ENST00000634363 DHX15O43143 795 aaKnown RBP17.56■□□□□ 0.4
SNRNP48-203ENST00000634363 CTDNEP1O95476 244 aa17.56■□□□□ 0.4
SNRNP48-203ENST00000634363 CRYBB1P53674 252 aaPredicted RBP17.56■□□□□ 0.4
SNRNP48-203ENST00000634363 UBE3AQ05086 875 aa17.56■□□□□ 0.4
SNRNP48-203ENST00000634363 CCDC83Q8IWF9 413 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms