RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CYP2U1Q7Z449 544 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 CCDC91Q7Z6B0 441 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 CREG2Q8IUH2 290 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 OR8H3Q8N146 312 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 LRRC43Q8N309 656 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 VWA5B2Q8N398 1253 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 TTC16Q8NEE8 873 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 MOSPD2Q8NHP6 518 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 OTUD7AQ8TE49 926 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 NANOS1Q8WY41 292 aaKnown RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 ATP2A3Q93084 1043 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 RRP36Q96EU6 259 aaKnown RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 NGLY1Q96IV0 654 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 RBM14Q96PK6 669 aaKnown RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 USB1Q9BQ65 265 aaKnown RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 EDEM3Q9BZQ6 932 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 TMEM60Q9H2L4 133 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 JMJD4Q9H9V9 463 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 INTS10Q9NVR2 710 aaKnown RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 QPCTLQ9NXS2 382 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 CABP1Q9NZU7 370 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 VPS28Q9UK41 221 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 HPCAL4Q9UM19 191 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 AXIN2Q9Y2T1 843 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 DENND4BO75064 1496 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 GPR75-ASB3A0A0A6YYF3 556 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 TRAV20A0A0B4J274 112 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 FAM227AF5H4B4 570 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 AP3B1O00203 1094 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 TUSC2O75896 110 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 CFBP00751 764 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 PEX2P28328 305 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 INPP5BP32019 993 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 ARFIP1P53367 373 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 SESN3P58005 492 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 AP2B1P63010 937 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 SGCGQ13326 291 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 SSPNQ14714 243 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 SMAD1Q15797 465 aaKnown RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 CFAP100Q494V2 611 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 HAUS3Q68CZ6 603 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 WDR73Q6P4I2 378 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 KCNV1Q6PIU1 500 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 DZIP1Q86YF9 867 aaKnown RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 LURAP1LQ8IV03 231 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 KIAA0319LQ8IZA0 1049 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 BICD1Q96G01 975 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 EYA3Q99504 573 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 ORAI3Q9BRQ5 295 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 UNKQ9C0B0 810 aaKnown RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 MAGEH1Q9H213 219 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 NCOR1P1Q9H4R4 102 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 ANTXR1Q9H6X2 564 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 VPS37BQ9H9H4 285 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 EVA1BQ9NVM1 165 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 PSD3Q9NYI0 1048 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 ORC3Q9UBD5 711 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-213ENST00000630925 TRAF3IP3Q9Y228 551 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 TRAPPC8Q9Y2L5 1435 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 RNF123Q5XPI4 1314 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 RAPGEF2Q9Y4G8 1499 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 LRP5O75197 1615 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 BIVM-ERCC5R4GMW8 1640 aa5.39□□□□□ -1.55
SDCBP-213ENST00000630925 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 KRBA1A5PL33 1030 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CACNB4O00305 520 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 KPNA5O15131 536 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 MAN1A2O60476 641 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 RTN2O75298 545 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 PALMO75781 387 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 KRT38O76015 456 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 IGFALSP35858 605 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 ASMTP46597 345 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 GSK3AP49840 483 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 FXR1P51114 621 aaKnown RBP eCLIP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 SCNN1BP51168 640 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 FCGRTP55899 365 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 NRG1Q02297 640 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CUL4AQ13619 759 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 PRKG1Q13976 671 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 LRP8Q14114 963 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 PPP4R3BQ5MIZ7 849 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 SPDYCQ5MJ68 293 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CCDC122Q5T0U0 273 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 SH3PXD2AQ5TCZ1 1133 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 BLOC1S3Q6QNY0 202 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 IL27RAQ6UWB1 636 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 PACS2Q86VP3 889 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 NOSTRINQ8IVI9 506 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CEP97Q8IW35 865 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 FAM13CQ8NE31 585 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TOR1AIP2Q8NFQ8 470 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 SUN5Q8TC36 379 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 SHC3Q92529 594 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 HTRA1Q92743 480 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 SLC10A4Q96EP9 437 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 TMEM237Q96Q45 408 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 DDX23Q9BUQ8 820 aaKnown RBP5.38□□□□□ -1.55
SDCBP-213ENST00000630925 CARD14Q9BXL6 1004 aa5.38□□□□□ -1.55
SDCBP-213ENST00000630925 SHANK2Q9UPX8 1470 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms