RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 FAM228AQ86W67 206 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 TRIM22Q8IYM9 498 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 DAGLBQ8NCG7 672 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 RDM1Q8NG50 284 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 UIMC1Q96RL1 719 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 ADAM2Q99965 735 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 LRFN3Q9BTN0 628 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 ELAC1Q9H777 363 aaKnown RBP14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 ALG13Q9NP73 1137 aaKnown RBP14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 DISC1Q9NRI5 854 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 PCDHA4Q9UN74 947 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 GINS2Q9Y248 185 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 PCDHB7Q9Y5E2 793 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 CYP46A1Q9Y6A2 500 aa14.09□□□□□ -0.15
SOX2-OT-247ENST00000628347 CYP3A7-CYP3A51PA0A087WV96 503 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 DENND3A2RUS2 1198 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 M0R2N6 131 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 ZNF862O60290 1169 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 PPFIA3O75145 1194 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 VTNP04004 478 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 OATP04181 439 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 CYP3A7P24462 503 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 DNAJB1P25685 340 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 GATMP50440 423 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 JAK3P52333 1124 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 KIZQ2M2Z5 673 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 PAN2Q504Q3 1202 aaKnown RBP14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 TMEM31Q5JXX7 168 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 GALNT17Q6IS24 598 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 MOXD1Q6UVY6 613 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 B3GNT9Q6UX72 402 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 METTL13Q8N6R0 699 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 KLHL23Q8NBE8 558 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 TBCKQ8TEA7 893 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 PPP2R3CQ969Q6 453 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 MBOAT7Q96N66 472 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 OSMRQ99650 979 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 TEKT3Q9BXF9 490 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 NRBP2Q9NSY0 501 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 SAMM50Q9Y512 469 aa14.08□□□□□ -0.16
SOX2-OT-247ENST00000628347 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 GAS7O60861 476 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 PSMD10O75832 226 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 TMOD1P28289 359 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 CLCN3P51790 818 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 PRKCEQ02156 737 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 UBE3AQ05086 875 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 ADAM15Q13444 863 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 NPY5RQ15761 445 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 LRCH2Q5VUJ6 765 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 EFCAB12Q6NXP0 572 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 CPLX2Q6PUV4 134 aaKnown RBP14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 POF1BQ8WVV4 589 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 MAP7D2Q96T17 732 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 ADAMTS10Q9H324 1103 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 UNC45AQ9H3U1 944 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 C11orf16Q9NQ32 467 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 TMEM161AQ9NX61 479 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 RAPGEFL1Q9UHV5 662 aa14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 ARIH1Q9Y4X5 557 aaPredicted RBP14.07□□□□□ -0.16
SOX2-OT-247ENST00000628347 PLXNA4Q9HCM2 1894 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 CPLX1O14810 134 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 ZP2Q05996 745 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 DLX2Q07687 328 aaPredicted RBP14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 TARBP2Q15633 366 aaKnown RBP14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 SMAD2Q15796 467 aaKnown RBP14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 UGCGQ16739 394 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 CSPP1Q1MSJ5 1256 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 EP400NLQ6ZTU2 488 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 ADHFE1Q8IWW8 467 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 BLIDQ8IZY5 108 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 ATP6V0A4Q9HBG4 840 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 AAASQ9NRG9 546 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 AKT3Q9Y243 479 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 PCDHB12Q9Y5F1 795 aa14.06□□□□□ -0.16
SOX2-OT-247ENST00000628347 TBKBP1A7MCY6 615 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 MBTPS2O43462 519 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 TBX10O75333 385 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 ALADP13716 330 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 EIF4BP23588 611 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 SSTR3P32745 418 aaPredicted RBP14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 GTF2F1P35269 517 aaKnown RBP eCLIP14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 IRS1P35568 1242 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 GPC3P51654 580 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 NLRP11P59045 1033 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 SMAD4Q13485 552 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 FAM102BQ5T8I3 360 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 TRMT1LQ7Z2T5 733 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 MIER3Q7Z3K6 550 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 LRRC71Q8N4P6 559 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 EFHBQ8N7U6 833 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 ETNPPLQ8TBG4 499 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 MSLNLQ96KJ4 702 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 PPP1R16BQ96T49 567 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 NIFKQ9BYG3 293 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 TMEM117Q9H0C3 514 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 CWH43Q9H720 699 aa14.05□□□□□ -0.16
SOX2-OT-247ENST00000628347 IGKV6-21A0A0C4DH24 114 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 LINC01565O15544 149 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 HOXA2O43364 376 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms