RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 FSCN2O14926 492 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 ATF7P17544 494 aaPredicted RBP18.71■□□□□ 0.59
TRIM29-221ENST00000627238 IRX6P78412 446 aaPredicted RBP18.71■□□□□ 0.59
TRIM29-221ENST00000627238 PLCB3Q01970 1234 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 DUSP6Q16828 381 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 FAM102BQ5T8I3 360 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 TMEM184AQ6ZMB5 413 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 FAM228AQ86W67 206 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 LINC01465Q8N7H1 131 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 RASGRP4Q8TDF6 673 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 CCDC12Q8WUD4 166 aaPredicted RBP18.71■□□□□ 0.59
TRIM29-221ENST00000627238 SUSD6Q92537 303 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 KCNB2Q92953 911 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 TCEANC2Q96MN5 208 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 ZNF577Q9BSK1 485 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 CWH43Q9H720 699 aa18.71■□□□□ 0.59
TRIM29-221ENST00000627238 USP34Q70CQ2 3546 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 TBKBP1A7MCY6 615 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 MAGEB2O15479 319 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 FGF18O76093 207 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 ADD1P35611 737 aaKnown RBP18.7■□□□□ 0.58
TRIM29-221ENST00000627238 PKN1Q16512 942 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 KIZQ2M2Z5 673 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 JAKMIP3Q5VZ66 844 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 REXO1Q8N1G1 1221 aaKnown RBP18.7■□□□□ 0.58
TRIM29-221ENST00000627238 COLGALT1Q8NBJ5 622 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 OSMRQ99650 979 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 PHF7Q9BWX1 381 aaPredicted RBP18.7■□□□□ 0.58
TRIM29-221ENST00000627238 TLE6Q9H808 572 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 ATP6V0A4Q9HBG4 840 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 TYW1Q9NV66 732 aaKnown RBP18.7■□□□□ 0.58
TRIM29-221ENST00000627238 BARX2Q9UMQ3 279 aaPredicted RBP18.7■□□□□ 0.58
TRIM29-221ENST00000627238 GINS2Q9Y248 185 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 USP15Q9Y4E8 981 aaPredicted RBP18.7■□□□□ 0.58
TRIM29-221ENST00000627238 PCDHA10Q9Y5I2 948 aa18.7■□□□□ 0.58
TRIM29-221ENST00000627238 HOXA2O43364 376 aa18.69■□□□□ 0.58
TRIM29-221ENST00000627238 CSPG5O95196 566 aa18.69■□□□□ 0.58
TRIM29-221ENST00000627238 PSAPP07602 524 aa18.69■□□□□ 0.58
TRIM29-221ENST00000627238 LAG3P18627 525 aa18.69■□□□□ 0.58
TRIM29-221ENST00000627238 METAP2P50579 478 aaKnown RBP eCLIP18.69■□□□□ 0.58
TRIM29-221ENST00000627238 RBM23Q86U06 439 aaKnown RBP18.69■□□□□ 0.58
TRIM29-221ENST00000627238 ALYREFQ86V81 257 aaKnown RBP18.69■□□□□ 0.58
TRIM29-221ENST00000627238 VN1R2Q8NFZ6 395 aa18.69■□□□□ 0.58
TRIM29-221ENST00000627238 FAM167AQ96KS9 214 aa18.69■□□□□ 0.58
TRIM29-221ENST00000627238 TMEM117Q9H0C3 514 aa18.69■□□□□ 0.58
TRIM29-221ENST00000627238 C6orf50Q9HD87 102 aa18.69■□□□□ 0.58
TRIM29-221ENST00000627238 PCDHGC5Q9Y5F6 944 aa18.69■□□□□ 0.58
TRIM29-221ENST00000627238 PRPF3O43395 683 aaKnown RBP18.68■□□□□ 0.58
TRIM29-221ENST00000627238 GNA11P29992 359 aa18.68■□□□□ 0.58
TRIM29-221ENST00000627238 ERVFC1P60507 584 aa18.68■□□□□ 0.58
TRIM29-221ENST00000627238 TRIM67Q6ZTA4 783 aa18.68■□□□□ 0.58
TRIM29-221ENST00000627238 LENG9Q96B70 501 aa18.68■□□□□ 0.58
TRIM29-221ENST00000627238 AGXT2Q9BYV1 514 aa18.68■□□□□ 0.58
TRIM29-221ENST00000627238 ADAMTS10Q9H324 1103 aa18.68■□□□□ 0.58
TRIM29-221ENST00000627238 WDR64B1ANS9 1081 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 ADAMTS3O15072 1205 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 VTNP04004 478 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 FGFR1P11362 822 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 MRE11P49959 708 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 ZXDAP98168 799 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 SPOUT1Q5T280 376 aaKnown RBP18.67■□□□□ 0.58
TRIM29-221ENST00000627238 CKAP2LQ8IYA6 745 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 THNSL1Q8IYQ7 743 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 BICD2Q8TD16 824 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 MRPS27Q92552 414 aaKnown RBP18.67■□□□□ 0.58
TRIM29-221ENST00000627238 CASD1Q96PB1 797 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 NGRNQ9NPE2 291 aaKnown RBP18.67■□□□□ 0.58
TRIM29-221ENST00000627238 RNF19AQ9NV58 838 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 HCSTQ9UBK5 93 aa18.67■□□□□ 0.58
TRIM29-221ENST00000627238 PPFIA3O75145 1194 aa18.66■□□□□ 0.58
TRIM29-221ENST00000627238 SRGAP2BP0DMP2 458 aa18.66■□□□□ 0.58
TRIM29-221ENST00000627238 EIF4BP23588 611 aaKnown RBP18.66■□□□□ 0.58
TRIM29-221ENST00000627238 TMOD1P28289 359 aa18.66■□□□□ 0.58
TRIM29-221ENST00000627238 PPM1AP35813 382 aa18.66■□□□□ 0.58
TRIM29-221ENST00000627238 LRRC55Q6ZSA7 311 aa18.66■□□□□ 0.58
TRIM29-221ENST00000627238 MICAL1Q8TDZ2 1067 aa18.66■□□□□ 0.58
TRIM29-221ENST00000627238 PRRX2Q99811 253 aa18.66■□□□□ 0.58
TRIM29-221ENST00000627238 RNF26Q9BY78 433 aaPredicted RBP18.66■□□□□ 0.58
TRIM29-221ENST00000627238 S1PR5Q9H228 398 aa18.66■□□□□ 0.58
TRIM29-221ENST00000627238 GABBR1Q9UBS5 961 aa18.66■□□□□ 0.58
TRIM29-221ENST00000627238 TCEAL9Q9UHQ7 104 aa18.66■□□□□ 0.58
TRIM29-221ENST00000627238 PUF60Q9UHX1 559 aaKnown RBP18.66■□□□□ 0.58
TRIM29-221ENST00000627238 TMEM221A6NGB7 291 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 M0R296 226 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 PER2O15055 1255 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 ZNF862O60290 1169 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 CDC45O75419 566 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 CLCN3P51790 818 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 NTRK3Q16288 839 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 PRR16Q569H4 304 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 EFCAB12Q6NXP0 572 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 CENPQQ7L2Z9 268 aaPredicted RBP18.65■□□□□ 0.58
TRIM29-221ENST00000627238 LRRC43Q8N309 656 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 METTL13Q8N6R0 699 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 RSPH1Q8WYR4 309 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 MAP7D2Q96T17 732 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 RIT2Q99578 217 aa18.65■□□□□ 0.58
TRIM29-221ENST00000627238 EDIL3O43854 480 aa18.64■□□□□ 0.57
TRIM29-221ENST00000627238 OATP04181 439 aa18.64■□□□□ 0.57
TRIM29-221ENST00000627238 HOXB8P17481 243 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms