RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 TLR2O60603 784 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 KIF11P52732 1056 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 HGSNATQ68CP4 663 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 STXBP4Q6ZWJ1 553 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 PDCL2Q8N4E4 241 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 MOV10L1Q9BXT6 1211 aaKnown RBP21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 GBP3Q9H0R5 595 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 METTL14Q9HCE5 456 aaKnown RBP21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 AGPAT3Q9NRZ7 376 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 BTBD7Q9P203 1132 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 DUSP10Q9Y6W6 482 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 CTAGE9A4FU28 777 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 TADA3O75528 432 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 IPO7O95373 1038 aaKnown RBP21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 CYP2J2P51589 502 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 SP4Q02446 784 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 PPP2R3AQ06190 1150 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 GADL1Q6ZQY3 521 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 CCDC43Q96MW1 224 aaKnown RBP21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 MYO1AQ9UBC5 1043 aa21.55■■□□□ 1.04
CHRNA4-209ENST00000627000 IRF6O14896 467 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 CNTN2Q02246 1040 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 FSTL1Q12841 308 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 NFIL3Q16649 462 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 XKR9Q5GH70 373 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 ZNF746Q6NUN9 644 aaPredicted RBP21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 LBX2Q6XYB7 198 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 FAM186BQ8IYM0 893 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 OTUD5Q96G74 571 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 DEF6Q9H4E7 631 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 PCDHA10Q9Y5I2 948 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 TFRCP02786 760 aaKnown RBP21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 PSMC2P35998 433 aaKnown RBP21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 ANO5Q75V66 913 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 HS2ST1Q7LGA3 356 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 NAPGQ99747 312 aaPredicted RBP21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 LARSQ9P2J5 1176 aaKnown RBP21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 GABBR1Q9UBS5 961 aa21.54■■□□□ 1.04
CHRNA4-209ENST00000627000 TISP43B9A030 160 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 MAFGO15525 162 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 PLS3P13797 630 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 VAV2P52735 878 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 SPA17Q15506 151 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 SFMBT2Q5VUG0 894 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 ZNF662Q6ZS27 426 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 SYCP3Q8IZU3 236 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 ARID3AQ99856 593 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 SENP7Q9BQF6 1050 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 DMAC2Q9NW81 257 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 AKR1B10O60218 316 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 ZNF862O60290 1169 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 PON1P27169 355 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 IREB2P48200 963 aaKnown RBP21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 RAPGEF1Q13905 1077 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 EXOC3L4Q17RC7 722 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 ASTE1Q2TB18 679 aaPredicted RBP21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 PCDHA13Q9Y5I0 950 aa21.53■■□□□ 1.04
CHRNA4-209ENST00000627000 A0A0G2JMZ2 1700 aa21.52■■□□□ 1.04
CHRNA4-209ENST00000627000 KRT86O43790 486 aa21.52■■□□□ 1.04
CHRNA4-209ENST00000627000 TDRD12Q587J7 1177 aaKnown RBP21.52■■□□□ 1.04
CHRNA4-209ENST00000627000 ANKRD35Q8N283 1001 aa21.52■■□□□ 1.04
CHRNA4-209ENST00000627000 ANKEF1Q9NU02 776 aa21.52■■□□□ 1.04
CHRNA4-209ENST00000627000 LCA5LO95447 670 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 ARID5AQ03989 594 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 GFPT1Q06210 699 aaPredicted RBP21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 CHST13Q8NET6 341 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 RDM1Q8NG50 284 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 CDCA5Q96FF9 252 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 IFIH1Q9BYX4 1025 aaKnown RBP21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 JPH1Q9HDC5 661 aaPredicted RBP21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 CDC23Q9UJX2 597 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 PEX3P56589 373 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 SP2Q02086 613 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 MAPK8IP2Q13387 824 aaPredicted RBP21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 FAM102BQ5T8I3 360 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 KLHDC7AQ5VTJ3 777 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 SWSAP1Q6NVH7 229 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 FAM133AQ8N9E0 248 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 UBXN4Q92575 508 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 SYN2Q92777 582 aaPredicted RBP21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 NUCKS1Q9H1E3 243 aaKnown RBP21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 R3HDMLQ9H3Y0 253 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 PLCB1Q9NQ66 1216 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 AJAP1Q9UKB5 411 aaPredicted RBP21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 FHOD1Q9Y613 1164 aa21.51■■□□□ 1.03
CHRNA4-209ENST00000627000 MACROD2A1Z1Q3 448 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 EFCAB8A8MWE9 144 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 SPATA31C2B4DYI2 1134 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 ENC1O14682 589 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 STBD1O95210 358 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 ENOX2Q16206 610 aaKnown RBP21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 RDH13Q8NBN7 331 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 MKNK1Q9BUB5 465 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 SIX2Q9NPC8 291 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 SLC9A2Q9UBY0 812 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 A0A0G2JLL6 359 aaPredicted RBP21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 SSU72P8A0A1W2PR75 194 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 SLC16A4O15374 487 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 SERPING1P05155 500 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 MAPTP10636 758 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms