RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 GARSP41250 739 aaKnown RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 KCNJ6P48051 423 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 SNAP25P60880 206 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 EXOSC10Q01780 885 aaKnown RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 TMED1Q13445 227 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 ERFEQ4G0M1 354 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 NYAP1Q6ZVC0 841 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 DGKHQ86XP1 1220 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 PDIK1LQ8N165 341 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 CCDC17Q96LX7 622 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 TTC7AQ9ULT0 858 aaPredicted RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 SNX12Q9UMY4 172 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 AKAP12Q02952 1782 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 A6NJR5 290 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 DCTN3O75935 186 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 BAG6P46379 1132 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 SCARF1Q14162 830 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 CENPUQ71F23 418 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 PCGF5Q86SE9 256 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 SUPT20HQ8NEM7 779 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 HPS3Q969F9 1004 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 HDAC11Q96DB2 347 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 CCT8L2Q96SF2 557 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 TUBB6Q9BUF5 446 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 MRPL46Q9H2W6 279 aaKnown RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 NXF1Q9UBU9 619 aaKnown RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 SEPT9Q9UHD8 586 aaPredicted RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 ANAPC7Q9UJX3 599 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 FBXO2Q9UK22 296 aaPredicted RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 ANGPTL2Q9UKU9 493 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 CAPN11Q9UMQ6 739 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 NOC2LQ9Y3T9 749 aaKnown RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 TARSL2A2RTX5 802 aaKnown RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 H0YCG3 227 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 H0YIN7 160 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 PPIP5K2O43314 1243 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 KRT14P02533 472 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 ITKQ08881 620 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 ZNF746Q6NUN9 644 aaPredicted RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 CCNI2Q6ZMN8 369 aaPredicted RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 EPM2AIP1Q7L775 607 aaPredicted RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 SFR1Q86XK3 245 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 CCNYQ8ND76 341 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 CFAP36Q96G28 342 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 TRIM55Q9BYV6 548 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 TMEM206Q9H813 350 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 AGPAT5Q9NUQ2 364 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 GOLGA8MH3BSY2 632 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 CDK8P49336 464 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ERFP50548 548 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 HLFQ16534 295 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ANKRD40Q6AI12 368 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 PPP4R3CPQ6ZMV5 832 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 RASGRP2Q7LDG7 609 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 KRT27Q7Z3Y8 459 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 FAM149B1Q96BN6 582 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 CEP170P1Q96L14 293 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 LRRC37BQ96QE4 947 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ANO3Q9BYT9 981 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 WDR11Q9BZH6 1224 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 HAUS2Q9NVX0 235 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ERBB3P21860 1342 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 HEG1Q9ULI3 1381 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 A0A1W2PQC6 194 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 EIF3HO15372 352 aaKnown RBP eCLIP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 MDH1P40925 334 aaKnown RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 PLA2G4AP47712 749 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 GCLMP48507 274 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 SEC24CP53992 1094 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 TMPRSS15P98073 1019 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 TFAMQ00059 246 aaKnown RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 IL1RL1Q01638 556 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 IFRD2Q12894 506 aaPredicted RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 KRT80Q6KB66 452 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 RNF207Q6ZRF8 634 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 CCDC117Q8IWD4 279 aaPredicted RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 KCTD6Q8NC69 237 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 SLC44A5Q8NCS7 719 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 LBHD1Q9BQE6 289 aaPredicted RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 MED10Q9BTT4 135 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ECT2Q9H8V3 914 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ADD3Q9UEY8 706 aaKnown RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 CNOT8Q9UFF9 292 aaKnown RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ATP10DQ9P241 1426 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 MIF4GDA9UHW6 222 aaKnown RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ZRANB2O95218 330 aaKnown RBP eCLIP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 NR3C1P04150 777 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 IRAK1P51617 712 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ESRRGP62508 458 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 PHEXP78562 749 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 COASYQ13057 564 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 NR1I3Q14994 352 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 SESTD1Q86VW0 696 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 MCF2L2Q86YR7 1114 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 GLYCTKQ8IVS8 523 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 DNAAF3Q8N9W5 541 aa6.04□□□□□ -1.44
ERCC6-213ENST00000624341 ZNF473Q8WTR7 871 aaKnown RBP6.04□□□□□ -1.44
ERCC6-213ENST00000624341 IL17RAQ96F46 866 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms