RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 KCTD2Q14681 263 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 MAP7D3Q8IWC1 876 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 CNOT10Q9H9A5 744 aaKnown RBP17.38■□□□□ 0.37
GABRB3-215ENST00000622697 SMYD2Q9NRG4 433 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 PDE1BQ01064 536 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 HP1BP3Q5SSJ5 553 aaPredicted RBP17.38■□□□□ 0.37
GABRB3-215ENST00000622697 XXYLT1Q8NBI6 393 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 RMDN3Q96TC7 470 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 EIF2AK1Q9BQI3 630 aaKnown RBP17.38■□□□□ 0.37
GABRB3-215ENST00000622697 MXD3Q9BW11 206 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 ITKQ08881 620 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 Q3C1V9 767 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 SULF1Q8IWU6 871 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 KCNB2Q92953 911 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 FAM213AQ9BRX8 229 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 MMEP08473 750 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 CDO1Q16878 200 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 ZNF710Q8N1W2 664 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 NLRP4Q96MN2 994 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 CCSER1Q9C0I3 900 aa17.38■□□□□ 0.37
GABRB3-215ENST00000622697 MYMKA6NI61 221 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 GIPC1O14908 333 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 FTLP02792 175 aaPredicted RBP17.37■□□□□ 0.37
GABRB3-215ENST00000622697 ST3GAL1Q11201 340 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 FAM20AQ96MK3 541 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 KLRK1P26718 216 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 GPC5P78333 572 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 TFDP1Q14186 410 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 OR6B2Q6IFH4 312 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 ZNF449Q6P9G9 518 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 TBC1D1Q86TI0 1168 aaPredicted RBP17.37■□□□□ 0.37
GABRB3-215ENST00000622697 CCNYQ8ND76 341 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 COG1Q8WTW3 980 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 FUCA2Q9BTY2 467 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 INTS2Q9H0H0 1204 aaKnown RBP17.37■□□□□ 0.37
GABRB3-215ENST00000622697 VCXQ9H320 206 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 THNSL1Q8IYQ7 743 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 AMACRQ9UHK6 382 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 NOC2LQ9Y3T9 749 aaKnown RBP17.37■□□□□ 0.37
GABRB3-215ENST00000622697 MCF2LO15068 1137 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 SRGNP10124 158 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 NAALADL2Q58DX5 795 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 NYAP1Q6ZVC0 841 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 ZNF668Q96K58 619 aaPredicted RBP17.37■□□□□ 0.37
GABRB3-215ENST00000622697 ZNF512BQ96KM6 892 aaPredicted RBP17.37■□□□□ 0.37
GABRB3-215ENST00000622697 KIAA1210Q9ULL0 1709 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 CNTNAP5Q8WYK1 1306 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 PLS3P13797 630 aa17.37■□□□□ 0.37
GABRB3-215ENST00000622697 EIF3BP55884 814 aaKnown RBP17.37■□□□□ 0.37
GABRB3-215ENST00000622697 TTC7AQ9ULT0 858 aaPredicted RBP17.37■□□□□ 0.37
GABRB3-215ENST00000622697 GOLGA8MH3BSY2 632 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 PTPAQ15257 358 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 C6orf118Q5T5N4 469 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 HSPH1Q92598 858 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 DCPSQ96C86 337 aaKnown RBP17.36■□□□□ 0.37
GABRB3-215ENST00000622697 CFAP36Q96G28 342 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 SNX12Q9UMY4 172 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 COL3A1P02461 1466 aaPredicted RBP17.36■□□□□ 0.37
GABRB3-215ENST00000622697 NOL3O60936 208 aaKnown RBP17.36■□□□□ 0.37
GABRB3-215ENST00000622697 PEX19P40855 299 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 BEND6Q5SZJ8 279 aaPredicted RBP17.36■□□□□ 0.37
GABRB3-215ENST00000622697 AFAP1L2Q8N4X5 818 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 NSMCE1Q8WV22 266 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 CFAP57Q96MR6 1250 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 LXNQ9BS40 222 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 ADAM22Q9P0K1 906 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 PNMA2Q9UL42 364 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 FLT1P17948 1338 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 TLR3O15455 904 aaKnown RBP17.36■□□□□ 0.37
GABRB3-215ENST00000622697 CA4P22748 312 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 DIP2AQ14689 1571 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 KIDINS220Q9ULH0 1771 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 VAMP7P51809 220 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 IRX4P78413 519 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 PPP1R18Q6NYC8 613 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 C11orf70Q9BRQ4 267 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 MTMR4Q9NYA4 1195 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 PPP1R3GB7ZBB8 358 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 STXBP3O00186 592 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 CTIFO43310 598 aaKnown RBP17.36■□□□□ 0.37
GABRB3-215ENST00000622697 FAM47EQ6ZV65 393 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 SH2D3CQ8N5H7 860 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 NUP85Q9BW27 656 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 SAYSD1Q9NPB0 183 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 GINM1Q9NU53 330 aa17.36■□□□□ 0.37
GABRB3-215ENST00000622697 RHOBTB3O94955 611 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 CD44P16070 742 aaKnown RBP17.35■□□□□ 0.37
GABRB3-215ENST00000622697 NT5C2P49902 561 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 NOA1Q8NC60 698 aaKnown RBP17.35■□□□□ 0.37
GABRB3-215ENST00000622697 RNF25Q96BH1 459 aaPredicted RBP17.35■□□□□ 0.37
GABRB3-215ENST00000622697 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.35■□□□□ 0.37
GABRB3-215ENST00000622697 DENND3A2RUS2 1198 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 MT-ND3P03897 115 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 CCDC93Q567U6 631 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 TMEM270Q6UE05 265 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 DCLK2Q8N568 766 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 HEXIM2Q96MH2 286 aaKnown RBP17.35■□□□□ 0.37
GABRB3-215ENST00000622697 GUCY1A3Q02108 690 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 MAP2P11137 1827 aaKnown RBP17.35■□□□□ 0.37
GABRB3-215ENST00000622697 IPO5O00410 1097 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms