RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 RC3H2Q9HBD1 1191 aaKnown RBP23.73■■□□□ 1.39
PMPCA-212ENST00000622209 CD320Q9NPF0 282 aa23.73■■□□□ 1.39
PMPCA-212ENST00000622209 PCDHA10Q9Y5I2 948 aa23.73■■□□□ 1.39
PMPCA-212ENST00000622209 SMIM35A0A1B0GVV1 85 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 H3BQV1 296 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 GRM6O15303 877 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 DGKIO75912 1065 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 RB1P06400 928 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 PSAPP07602 524 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 LINC00271P0C7V0 271 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 IBSPP21815 317 aaPredicted RBP23.72■■□□□ 1.39
PMPCA-212ENST00000622209 SFNP31947 248 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 SLC26A2P50443 739 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 PAK2Q13177 524 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 TMEM266Q2M3C6 531 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 LARP1BQ659C4 914 aaKnown RBP23.72■■□□□ 1.39
PMPCA-212ENST00000622209 PTCRAQ6ISU1 281 aaPredicted RBP23.72■■□□□ 1.39
PMPCA-212ENST00000622209 CCDC60Q8IWA6 550 aaPredicted RBP23.72■■□□□ 1.39
PMPCA-212ENST00000622209 NME8Q8N427 588 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 KHSRPQ92945 711 aaKnown RBP eCLIP23.72■■□□□ 1.39
PMPCA-212ENST00000622209 ZNF689Q96CS4 500 aaPredicted RBP23.72■■□□□ 1.39
PMPCA-212ENST00000622209 NSUN3Q9H649 340 aaKnown RBP23.72■■□□□ 1.39
PMPCA-212ENST00000622209 ZNF302Q9NR11 478 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 GINS2Q9Y248 185 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 SQORQ9Y6N5 450 aa23.72■■□□□ 1.39
PMPCA-212ENST00000622209 SIP14410 1827 aa23.71■■□□□ 1.39
PMPCA-212ENST00000622209 WDR64B1ANS9 1081 aa23.71■■□□□ 1.39
PMPCA-212ENST00000622209 C5orf67F2Z3F1 127 aa23.71■■□□□ 1.39
PMPCA-212ENST00000622209 HBP1O60381 514 aa23.71■■□□□ 1.39
PMPCA-212ENST00000622209 CSPG5O95196 566 aa23.71■■□□□ 1.39
PMPCA-212ENST00000622209 BAG4O95429 457 aaKnown RBP23.71■■□□□ 1.39
PMPCA-212ENST00000622209 PDXDC2PQ6P474 469 aa23.71■■□□□ 1.39
PMPCA-212ENST00000622209 TRMT1LQ7Z2T5 733 aaKnown RBP23.71■■□□□ 1.39
PMPCA-212ENST00000622209 HSCBQ8IWL3 235 aa23.71■■□□□ 1.39
PMPCA-212ENST00000622209 RDM1Q8NG50 284 aa23.71■■□□□ 1.39
PMPCA-212ENST00000622209 ATP8B4Q8TF62 1192 aa23.71■■□□□ 1.39
PMPCA-212ENST00000622209 C11orf84Q9BUA3 381 aaPredicted RBP23.71■■□□□ 1.39
PMPCA-212ENST00000622209 FTHL17Q9BXU8 183 aa23.71■■□□□ 1.39
PMPCA-212ENST00000622209 IGSF9BQ9UPX0 1349 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 MARCH6O60337 910 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 IL9P15248 144 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 TRAPPC10P48553 1259 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 JAK3P52333 1124 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 B3GNT9Q6UX72 402 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 SLFN12Q8IYM2 578 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 NEK9Q8TD19 979 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 CLP1Q92989 425 aaKnown RBP23.7■■□□□ 1.38
PMPCA-212ENST00000622209 GJA10Q969M2 543 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 UNC45AQ9H3U1 944 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 CDHR5Q9HBB8 845 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 DISC1Q9NRI5 854 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 RWDD3Q9Y3V2 267 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 SAMM50Q9Y512 469 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 BRWD1Q9NSI6 2320 aa23.7■■□□□ 1.38
PMPCA-212ENST00000622209 ATP4AP20648 1035 aa23.69■■□□□ 1.38
PMPCA-212ENST00000622209 PDCP20941 246 aa23.69■■□□□ 1.38
PMPCA-212ENST00000622209 NFX1Q12986 1120 aaKnown RBP23.69■■□□□ 1.38
PMPCA-212ENST00000622209 ORC2Q13416 577 aaPredicted RBP23.69■■□□□ 1.38
PMPCA-212ENST00000622209 PAN2Q504Q3 1202 aaKnown RBP23.69■■□□□ 1.38
PMPCA-212ENST00000622209 POTEDQ86YR6 584 aa23.69■■□□□ 1.38
PMPCA-212ENST00000622209 NPAS4Q8IUM7 802 aa23.69■■□□□ 1.38
PMPCA-212ENST00000622209 FAM178BQ8IXR5 827 aa23.69■■□□□ 1.38
PMPCA-212ENST00000622209 CKAP2LQ8IYA6 745 aa23.69■■□□□ 1.38
PMPCA-212ENST00000622209 KIAA0319LQ8IZA0 1049 aa23.69■■□□□ 1.38
PMPCA-212ENST00000622209 HAS1Q92839 578 aa23.69■■□□□ 1.38
PMPCA-212ENST00000622209 PABPC5Q96DU9 382 aaKnown RBP23.69■■□□□ 1.38
PMPCA-212ENST00000622209 TMX1Q9H3N1 280 aa23.69■■□□□ 1.38
PMPCA-212ENST00000622209 NOL7Q9UMY1 257 aaKnown RBP23.69■■□□□ 1.38
PMPCA-212ENST00000622209 MAFBQ9Y5Q3 323 aaPredicted RBP23.69■■□□□ 1.38
PMPCA-212ENST00000622209 MRPL42Q9Y6G3 142 aaKnown RBP23.69■■□□□ 1.38
PMPCA-212ENST00000622209 COL4A6Q14031 1691 aa23.68■■□□□ 1.38
PMPCA-212ENST00000622209 GRXCR2A6NFK2 248 aa23.68■■□□□ 1.38
PMPCA-212ENST00000622209 ZNF484Q5JVG2 852 aa23.68■■□□□ 1.38
PMPCA-212ENST00000622209 MCTP1Q6DN14 999 aa23.68■■□□□ 1.38
PMPCA-212ENST00000622209 CRIPAKQ8N1N5 446 aa23.68■■□□□ 1.38
PMPCA-212ENST00000622209 PPP1R16BQ96T49 567 aa23.68■■□□□ 1.38
PMPCA-212ENST00000622209 ALG13Q9NP73 1137 aaKnown RBP23.68■■□□□ 1.38
PMPCA-212ENST00000622209 CLDND1Q9NY35 253 aa23.68■■□□□ 1.38
PMPCA-212ENST00000622209 KAT6AQ92794 2004 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 KDM3AQ9Y4C1 1321 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 WNT7AO00755 349 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 CHMP2AO43633 222 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 NEMFO60524 1076 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 STAG3L1P0CL83 205 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 ATP2B1P20020 1258 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 GATMP50440 423 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 PPP2R5CQ13362 524 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 CALCRLQ16602 461 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 MIER3Q7Z3K6 550 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 GJD3Q8N144 294 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 LMAN2LQ9H0V9 348 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 LRFN2Q9ULH4 789 aa23.67■■□□□ 1.38
PMPCA-212ENST00000622209 NOC2LQ9Y3T9 749 aaKnown RBP23.67■■□□□ 1.38
PMPCA-212ENST00000622209 ZBTB42B2RXF5 422 aa23.66■■□□□ 1.38
PMPCA-212ENST00000622209 SSTR3P32745 418 aaPredicted RBP23.66■■□□□ 1.38
PMPCA-212ENST00000622209 CMTR2Q8IYT2 770 aaKnown RBP23.66■■□□□ 1.38
PMPCA-212ENST00000622209 LRFN3Q9BTN0 628 aa23.66■■□□□ 1.38
PMPCA-212ENST00000622209 IGFLR1Q9H665 355 aa23.66■■□□□ 1.38
PMPCA-212ENST00000622209 GABBR1Q9UBS5 961 aa23.66■■□□□ 1.38
PMPCA-212ENST00000622209 VAV3Q9UKW4 847 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms