RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SLC39A2Q9NP94 309 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 INCENPQ9NQS7 918 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 TMPRSS11EQ9UL52 423 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 EDARQ9UNE0 448 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 APOL3O95236 402 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 ASGR2P07307 311 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 PFKMP08237 780 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 LPOP22079 712 aaPredicted RBP6.42□□□□□ -1.38
CPNE3-213ENST00000622183 FBLN1P23142 703 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 RGS3P49796 1198 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 ZNF200P98182 395 aaPredicted RBP6.42□□□□□ -1.38
CPNE3-213ENST00000622183 PFKPQ01813 784 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 MUM1Q2TAK8 710 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 VASNQ6EMK4 673 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 UNQ6494/PRO21346Q6UXR6 183 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 EPM2AIP1Q7L775 607 aaPredicted RBP6.42□□□□□ -1.38
CPNE3-213ENST00000622183 ZSWIM9Q86XI8 627 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 LYSMD2Q8IV50 215 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 IGDCC4Q8TDY8 1250 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 CLIP3Q96DZ5 547 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 RNF38Q9H0F5 515 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 KCTD10Q9H3F6 313 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 GALNT8Q9NY28 637 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 ZBTB21Q9ULJ3 1066 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
CPNE3-213ENST00000622183 VSTM5A8MXK1 200 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 KRT18P05783 430 aaKnown RBP6.41□□□□□ -1.38
CPNE3-213ENST00000622183 OSMP13725 252 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 C5AR1P21730 350 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 VIPR1P32241 457 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 SLC5A3P53794 718 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 ADKP55263 362 aaKnown RBP6.41□□□□□ -1.38
CPNE3-213ENST00000622183 BCAR1P56945 870 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 CACNB2Q08289 660 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-213ENST00000622183 KCNMB1Q16558 191 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 MINDY4Q4G0A6 757 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 RRP12Q5JTH9 1297 aaKnown RBP6.41□□□□□ -1.38
CPNE3-213ENST00000622183 ARTNQ5T4W7 220 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 LIPIQ6XZB0 460 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 DGKHQ86XP1 1220 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 FAM26EQ8N5C1 309 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 DTX3Q8N9I9 347 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 AUTS2Q8WXX7 1259 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 PRDM12Q9H4Q4 367 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 ZNF552Q9H707 407 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-213ENST00000622183 RBPJLQ9UBG7 517 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 DENND2AQ9ULE3 1009 aa6.41□□□□□ -1.38
CPNE3-213ENST00000622183 BIN1O00499 593 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 MAFO75444 373 aaPredicted RBP6.4□□□□□ -1.38
CPNE3-213ENST00000622183 LPLP06858 475 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 C8BP07358 591 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 NCAM1P13591 858 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 AKAP5P24588 427 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 ECE1P42892 770 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 MBNL2Q5VZF2 373 aaKnown RBP6.4□□□□□ -1.38
CPNE3-213ENST00000622183 LRSAM1Q6UWE0 723 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 CD300LDQ6UXZ3 194 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 SLC41A1Q8IVJ1 513 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 RPGRQ92834 1020 aaKnown RBP6.4□□□□□ -1.38
CPNE3-213ENST00000622183 TMEM209Q96SK2 561 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 BTBD2Q9BX70 525 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 CSRNP2Q9H175 543 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 MTG2Q9H4K7 406 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 ARNT2Q9HBZ2 717 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 ANLNQ9NQW6 1124 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 OBP2AQ9NY56 170 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 DPP7Q9UHL4 492 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 WASF3Q9UPY6 502 aa6.4□□□□□ -1.38
CPNE3-213ENST00000622183 OAS3Q9Y6K5 1087 aaKnown RBP6.4□□□□□ -1.38
CPNE3-213ENST00000622183 ERC2O15083 957 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 MAFGO15525 162 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 NDUFS2O75306 463 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 APEX1P27695 318 aaKnown RBP6.39□□□□□ -1.39
CPNE3-213ENST00000622183 LGALS4P56470 323 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 TRIM25Q14258 630 aaKnown RBP6.39□□□□□ -1.39
CPNE3-213ENST00000622183 NOLC1Q14978 699 aaKnown RBP eCLIP6.39□□□□□ -1.39
CPNE3-213ENST00000622183 TARBP2Q15633 366 aaKnown RBP6.39□□□□□ -1.39
CPNE3-213ENST00000622183 SKIDA1Q1XH10 827 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 MAP9Q49MG5 647 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 TMC5Q6UXY8 1006 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 OR14C36Q8NHC7 312 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 TSPEARQ8WU66 669 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 SLC2A13Q96QE2 648 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 PITHD1Q9GZP4 211 aaPredicted RBP6.39□□□□□ -1.39
CPNE3-213ENST00000622183 OR10A5Q9H207 317 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 SLC12A5Q9H2X9 1139 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 IFT122Q9HBG6 1241 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 NMRK2Q9NPI5 230 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 PRDM11Q9NQV5 511 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 DLL4Q9NR61 685 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 PRSS50Q9UI38 385 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 TUBD1Q9UJT1 453 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 MYPNQ86TC9 1320 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 IRS2Q9Y4H2 1338 aa6.39□□□□□ -1.39
CPNE3-213ENST00000622183 A0A0A6YYJ9 748 aa6.38□□□□□ -1.39
CPNE3-213ENST00000622183 SCO2A0A1W2PP80 73 aa6.38□□□□□ -1.39
CPNE3-213ENST00000622183 PCDH8O95206 1070 aa6.38□□□□□ -1.39
CPNE3-213ENST00000622183 MYL1P05976 194 aa6.38□□□□□ -1.39
CPNE3-213ENST00000622183 HSPA6P17066 643 aa6.38□□□□□ -1.39
CPNE3-213ENST00000622183 NFATC3Q12968 1075 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms