RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 ELNP15502 786 aa17.59■□□□□ 0.41
CBWD3-216ENST00000621396 CCNE1P24864 410 aa17.59■□□□□ 0.41
CBWD3-216ENST00000621396 TPM4P67936 248 aa17.59■□□□□ 0.41
CBWD3-216ENST00000621396 DRP2Q13474 957 aa17.59■□□□□ 0.41
CBWD3-216ENST00000621396 GUF1Q8N442 669 aaKnown RBP17.59■□□□□ 0.41
CBWD3-216ENST00000621396 DHTKD1Q96HY7 919 aaPredicted RBP17.59■□□□□ 0.41
CBWD3-216ENST00000621396 XPNPEP1Q9NQW7 623 aa17.59■□□□□ 0.41
CBWD3-216ENST00000621396 LAMC2Q13753 1193 aa17.59■□□□□ 0.41
CBWD3-216ENST00000621396 IRF2BP1Q8IU81 584 aa17.59■□□□□ 0.41
CBWD3-216ENST00000621396 OR6J1Q8NGC5 347 aa17.59■□□□□ 0.41
CBWD3-216ENST00000621396 BSNDQ8WZ55 320 aa17.59■□□□□ 0.41
CBWD3-216ENST00000621396 PDLIM2Q96JY6 352 aa17.59■□□□□ 0.41
CBWD3-216ENST00000621396 ZNF131P52739 623 aa17.58■□□□□ 0.41
CBWD3-216ENST00000621396 POLGP54098 1239 aaPredicted RBP17.58■□□□□ 0.41
CBWD3-216ENST00000621396 IGBP1P78318 339 aa17.58■□□□□ 0.41
CBWD3-216ENST00000621396 CCDC173Q0VFZ6 552 aa17.58■□□□□ 0.41
CBWD3-216ENST00000621396 FAM160B1Q5W0V3 765 aa17.58■□□□□ 0.41
CBWD3-216ENST00000621396 CENPPQ6IPU0 288 aa17.58■□□□□ 0.41
CBWD3-216ENST00000621396 KCND2Q9NZV8 630 aa17.58■□□□□ 0.41
CBWD3-216ENST00000621396 NRBP1Q9UHY1 535 aa17.58■□□□□ 0.41
CBWD3-216ENST00000621396 ODF2LQ9ULJ1 636 aa17.58■□□□□ 0.41
CBWD3-216ENST00000621396 TRPC6Q9Y210 931 aa17.58■□□□□ 0.41
CBWD3-216ENST00000621396 LGALS2P05162 132 aa17.58■□□□□ 0.4
CBWD3-216ENST00000621396 UBASH3AP57075 661 aa17.58■□□□□ 0.4
CBWD3-216ENST00000621396 ZNF720Q7Z2F6 126 aa17.58■□□□□ 0.4
CBWD3-216ENST00000621396 DRC7Q8IY82 874 aa17.58■□□□□ 0.4
CBWD3-216ENST00000621396 TRPV1Q8NER1 839 aa17.58■□□□□ 0.4
CBWD3-216ENST00000621396 ZNF668Q96K58 619 aaPredicted RBP17.58■□□□□ 0.4
CBWD3-216ENST00000621396 SLC16A4O15374 487 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 DKC1O60832 514 aaKnown RBP eCLIP17.57■□□□□ 0.4
CBWD3-216ENST00000621396 CNGA1P29973 690 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 MAP2K2P36507 400 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 BEX3Q00994 111 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 PLCB4Q15147 1175 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 CDKAL1Q5VV42 579 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 IQSEC1Q6DN90 963 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 PPTC7Q8NI37 304 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 AFAP1L1Q8TED9 768 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 SUGCTQ9HAC7 445 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 OLFML3Q9NRN5 406 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 USP20Q9Y2K6 914 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 CCDC169A6NNP5 214 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 TISP43B9A030 160 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 K7ENM7 598 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 SARM1Q6SZW1 724 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 EPM2AIP1Q7L775 607 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-216ENST00000621396 LRRC71Q8N4P6 559 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 PPP1R9BQ96SB3 815 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 CEP89Q96ST8 783 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 KCTD10Q9H3F6 313 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 INTS13Q9NVM9 706 aa17.57■□□□□ 0.4
CBWD3-216ENST00000621396 LARSQ9P2J5 1176 aaKnown RBP17.57■□□□□ 0.4
CBWD3-216ENST00000621396 ZBTB42B2RXF5 422 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 CLIC2O15247 247 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 LGR5O75473 907 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 DGAT1O75907 488 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 GJB1P08034 283 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 EMC2Q15006 297 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 CT47A1Q5JQC4 288 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-216ENST00000621396 TLK2Q86UE8 772 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 VPS16Q9H269 839 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 PDLIM7Q9NR12 457 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 GNEQ9Y223 722 aaKnown RBP17.56■□□□□ 0.4
CBWD3-216ENST00000621396 MMP3P08254 477 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 PLS3P13797 630 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 APTXQ7Z2E3 356 aaKnown RBP17.56■□□□□ 0.4
CBWD3-216ENST00000621396 MSL3Q8N5Y2 521 aaKnown RBP17.56■□□□□ 0.4
CBWD3-216ENST00000621396 C16orf70Q9BSU1 422 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 SMARCAD1Q9H4L7 1026 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 ATP6V0A4Q9HBG4 840 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 NRBP2Q9NSY0 501 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 TAB2Q9NYJ8 693 aa17.56■□□□□ 0.4
CBWD3-216ENST00000621396 ADGRA3Q8IWK6 1321 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 KCNJ18B7U540 433 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 GPR25O00155 361 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 TEX33O43247 280 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-216ENST00000621396 GAP43P17677 238 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 NPTX2P47972 431 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 KCNJ12Q14500 433 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 COBLL1Q53SF7 1204 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 SLC7A3Q8WY07 619 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 ZNF830Q96NB3 372 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-216ENST00000621396 NIFKQ9BYG3 293 aaKnown RBP17.55■□□□□ 0.4
CBWD3-216ENST00000621396 POLR3FQ9H1D9 316 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-216ENST00000621396 MGAMO43451 1857 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 ZNF236Q9UL36 1845 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 BICDL2A1A5D9 508 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 KIF22Q14807 665 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 KRT31Q15323 416 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 TARBP2Q15633 366 aaKnown RBP17.55■□□□□ 0.4
CBWD3-216ENST00000621396 KNOP1Q1ED39 458 aaKnown RBP17.55■□□□□ 0.4
CBWD3-216ENST00000621396 ZCWPW2Q504Y3 356 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 TCP11X2Q5H9J9 407 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 PLPPR4Q7Z2D5 763 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 ATP8B4Q8TF62 1192 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 DRC1Q96MC2 740 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 DHX33Q9H6R0 707 aaKnown RBP17.55■□□□□ 0.4
CBWD3-216ENST00000621396 ERAP1Q9NZ08 941 aa17.55■□□□□ 0.4
CBWD3-216ENST00000621396 MYH11P35749 1972 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms