RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 COL1A1P02452 1464 aaPredicted RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 BAZ2AQ9UIF9 1905 aaKnown RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 FAM237AA0A1B0GTK4 181 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 hCG_1984214I3L0E3 225 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 PEX10O60683 326 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 PRPHP41219 470 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 STRN3Q13033 797 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 ALKBH5Q6P6C2 394 aaKnown RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 ZNF713Q8N859 430 aaPredicted RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 SLC16A10Q8TF71 515 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 RPGRIP1Q96KN7 1286 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 LXNQ9BS40 222 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 TRIM7Q9C029 511 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 TMEM51Q9NW97 253 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 CAPN6Q9Y6Q1 641 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 LRP6O75581 1613 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 ZBTB39O15060 712 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 SASH3O75995 380 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 TBC1D8O95759 1140 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 SRGAP2CP0DJJ0 459 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 H2AFXP16104 143 aaPredicted RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 CNGA1P29973 690 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 DPP9Q86TI2 863 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 DEPTORQ8TB45 409 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 MIPOL1Q8TD10 442 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 LMBR1Q8WVP7 490 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 FAM163AQ96GL9 167 aaPredicted RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 DUSP9Q99956 384 aaKnown RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 TRIM6Q9C030 488 aaPredicted RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 FEM1BQ9UK73 627 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 PVALEFA0A1B0GWK0 134 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 GNA14O95837 355 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 EGFRP00533 1210 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 CYP2C19P33261 490 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 RPS6P62753 249 aaKnown RBP9.84□□□□□ -0.83
GGA3-222ENST00000621217 AP3B2Q13367 1082 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 SETDB1Q15047 1291 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 SWSAP1Q6NVH7 229 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 RUFY4Q6ZNE9 571 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 TMEM139Q8IV31 216 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 RPUSD2Q8IZ73 545 aaKnown RBP9.84□□□□□ -0.83
GGA3-222ENST00000621217 NLGN2Q8NFZ4 835 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 NACC1Q96RE7 527 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 REEP2Q9BRK0 252 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 WDR11Q9BZH6 1224 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 PARVGQ9HBI0 331 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 PPANQ9NQ55 473 aaKnown RBP9.84□□□□□ -0.83
GGA3-222ENST00000621217 GAKO14976 1311 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 STRCQ7RTU9 1775 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 KIF3CO14782 793 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 EPHB6O15197 1021 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 MED24O75448 989 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 NPEPPSP55786 919 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 HERVK_113P62684 666 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 MESDQ14696 234 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 CACNA2D3Q8IZS8 1091 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 TNFRSF25Q93038 417 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 OSBPL9Q96SU4 736 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 IMPG2Q9BZV3 1241 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 SYNCQ9H7C4 482 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 GEMIN8Q9NWZ8 242 aaKnown RBP9.84□□□□□ -0.83
GGA3-222ENST00000621217 A0A1W2PQC6 194 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 FRMD3A2A2Y4 597 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 E7EVH7 732 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 CHUKO15111 745 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 SLC16A4O15374 487 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 NR3C1P04150 777 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 GBP1P32455 592 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 GGCXP38435 758 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 BIRC2Q13490 618 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 PLA2G4FQ68DD2 849 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 MOB2Q70IA6 237 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 CNPY4Q8N129 248 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 TAB3Q8N5C8 712 aaPredicted RBP9.84□□□□□ -0.83
GGA3-222ENST00000621217 TAAR1Q96RJ0 339 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 CXorf56Q9H5V9 222 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 YY1AP1Q9H869 796 aa9.84□□□□□ -0.83
GGA3-222ENST00000621217 PDS5AQ29RF7 1337 aaKnown RBP9.84□□□□□ -0.83
GGA3-222ENST00000621217 TMEM150BA6NC51 233 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 VIMP08670 466 aaKnown RBP9.83□□□□□ -0.84
GGA3-222ENST00000621217 IREB2P48200 963 aaKnown RBP9.83□□□□□ -0.84
GGA3-222ENST00000621217 LIG4P49917 911 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 PLCB3Q01970 1234 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 ZNF211Q13398 564 aaPredicted RBP9.83□□□□□ -0.84
GGA3-222ENST00000621217 ZNF280CQ8ND82 737 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 ELMO3Q96BJ8 720 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 PNMA5Q96PV4 448 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 GABBR1Q9UBS5 961 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 PTPN22Q9Y2R2 807 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 INO80B-WBP1J3KQ70 363 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 SERPING1P05155 500 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 ARP10275 920 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 GRIPAP1Q4V328 841 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 FAM47CQ5HY64 1035 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 PADI6Q6TGC4 694 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 OTUD6AQ7L8S5 288 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 CATSPER3Q86XQ3 398 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 INO80BQ9C086 356 aaPredicted RBP9.83□□□□□ -0.84
GGA3-222ENST00000621217 RIOX1Q9H6W3 641 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 DOT1LQ8TEK3 1739 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms