RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 TBC1D22BQ9NU19 505 aa9.64□□□□□ -0.87
GTF2I-219ENST00000621040 RANBP2P49792 3224 aaKnown RBP9.64□□□□□ -0.87
GTF2I-219ENST00000621040 USP27XA6NNY8 438 aa9.64□□□□□ -0.87
GTF2I-219ENST00000621040 E2F4Q16254 413 aa9.64□□□□□ -0.87
GTF2I-219ENST00000621040 JAKMIP3Q5VZ66 844 aa9.64□□□□□ -0.87
GTF2I-219ENST00000621040 CAGE1Q8TC20 777 aa9.64□□□□□ -0.87
GTF2I-219ENST00000621040 FAM200AQ8TCP9 573 aa9.64□□□□□ -0.87
GTF2I-219ENST00000621040 TBCKQ8TEA7 893 aa9.64□□□□□ -0.87
GTF2I-219ENST00000621040 CALR3Q96L12 384 aaKnown RBP9.64□□□□□ -0.87
GTF2I-219ENST00000621040 ALG1Q9BT22 464 aa9.64□□□□□ -0.87
GTF2I-219ENST00000621040 SLC9A2Q9UBY0 812 aa9.64□□□□□ -0.87
GTF2I-219ENST00000621040 SLC37A4O43826 429 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 SUPT20HL2P0C7V6 817 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 ZNF286BP0CG31 522 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 CORO7P57737 925 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 HABP4Q5JVS0 413 aaKnown RBP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 CACTINQ8WUQ7 758 aaKnown RBP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 TRPV6Q9H1D0 765 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 CLSTN2Q9H4D0 955 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 RTEL1Q9NZ71 1219 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 KCNJ14Q9UNX9 436 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 KDM3AQ9Y4C1 1321 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 MYL3P08590 195 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 SMIM10L2AP0DMW4 78 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 SMIM10L2BP0DMW5 78 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 ACTN2P35609 894 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 FXR1P51114 621 aaKnown RBP eCLIP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 ACTR2P61160 394 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 BIRC2Q13490 618 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 TARBP2Q15633 366 aaKnown RBP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 BRDTQ58F21 947 aaPredicted RBP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 CEP135Q66GS9 1140 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 KRT40Q6A162 431 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 NYAP1Q6ZVC0 841 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 SEPT1Q8WYJ6 367 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 HERVK_113Q902F9 699 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 NAP1L4Q99733 375 aaKnown RBP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 TRMT13Q9NUP7 481 aaKnown RBP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 ATP11BQ9Y2G3 1177 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 TRANK1O15050 2925 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 DCDC2CA8MYV0 355 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 EIF3CLB5ME19 914 aaKnown RBP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 PFKMP08237 780 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 TCF7P36402 384 aaPredicted RBP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 CLCN6P51797 869 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 MBTPS1Q14703 1052 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 NONOQ15233 471 aaKnown RBP eCLIP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 FAM109BQ6ICB4 259 aaPredicted RBP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 CRIPAKQ8N1N5 446 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 ENGASEQ8NFI3 743 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 DPF3Q92784 378 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 EIF3CQ99613 913 aaKnown RBP9.63□□□□□ -0.87
GTF2I-219ENST00000621040 HDAC6Q9UBN7 1215 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 UMODL1Q5DID0 1318 aa9.63□□□□□ -0.87
GTF2I-219ENST00000621040 H3BRB1 525 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 IPO5O00410 1097 aaKnown RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 CPLX1O14810 134 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 TLR3O15455 904 aaKnown RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 KRT2P35908 639 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 ATN1P54259 1190 aaPredicted RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 PLCB4Q15147 1175 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 PPP2R5AQ15172 486 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 KIAA0753Q2KHM9 967 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 TCTN1Q2MV58 587 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 CCDC186Q7Z3E2 898 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 ERCC4Q92889 916 aaPredicted RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 DNAJC25Q9H1X3 360 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 TUT1Q9H6E5 874 aaKnown RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 NRCAMQ92823 1304 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 FAM205CA6NFA0 338 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 KIF28PB7ZC32 967 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 SLU7O95391 586 aaKnown RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 PARNO95453 639 aaKnown RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 TDP2O95551 362 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 ZNF75DP51815 510 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 NLRP5P59047 1200 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 KRT76Q01546 638 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 AKAP17AQ02040 695 aaKnown RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 TDHQ8IZJ6 230 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 BADQ92934 168 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 FAXDC2Q96IV6 333 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 FAM20AQ96MK3 541 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 NUP62CLQ9H1M0 184 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 RNPEPQ9H4A4 650 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 IL23AQ9NPF7 189 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 KCND1Q9NSA2 647 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 IGKV6-21A0A0C4DH24 114 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 CCDC192P0DO97 292 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 KRT85P78386 507 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 CEBPZQ03701 1054 aaKnown RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 TMEM240Q5SV17 173 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 NEK8Q86SG6 692 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 CCDC60Q8IWA6 550 aaPredicted RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 DHX40Q8IX18 779 aaKnown RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 NIFKQ9BYG3 293 aaKnown RBP9.62□□□□□ -0.87
GTF2I-219ENST00000621040 SMARCAD1Q9H4L7 1026 aa9.62□□□□□ -0.87
GTF2I-219ENST00000621040 PQBP1O60828 265 aaKnown RBP9.61□□□□□ -0.87
GTF2I-219ENST00000621040 LYPLA2O95372 231 aa9.61□□□□□ -0.87
GTF2I-219ENST00000621040 IQCF3P0C7M6 154 aa9.61□□□□□ -0.87
GTF2I-219ENST00000621040 TRAPPC10P48553 1259 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms