RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 CASP4P49662 377 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 HDLBPQ00341 1268 aaKnown RBP11.64□□□□□ -0.55
CDH1-214ENST00000621016 CCDC15Q0P6D6 951 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 CTTNQ14247 550 aaKnown RBP11.64□□□□□ -0.55
CDH1-214ENST00000621016 SLFN13Q68D06 897 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 SFR1Q86XK3 245 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 TPH2Q8IWU9 490 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 CCDC43Q96MW1 224 aaKnown RBP11.64□□□□□ -0.55
CDH1-214ENST00000621016 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.64□□□□□ -0.55
CDH1-214ENST00000621016 SNED1Q8TER0 1413 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 PVALEFA0A1B0GWK0 134 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 FSBPO95073 299 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 MYBP10242 640 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 CDC37Q16543 378 aaPredicted RBP11.63□□□□□ -0.55
CDH1-214ENST00000621016 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
CDH1-214ENST00000621016 CCDC121Q6ZUS5 278 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 SAPCD2Q86UD0 394 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 FAM81AQ8TBF8 368 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 SCFD1Q8WVM8 642 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 DNAJC19Q96DA6 116 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 TMX4Q9H1E5 349 aaPredicted RBP11.63□□□□□ -0.55
CDH1-214ENST00000621016 ZBTB21Q9ULJ3 1066 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 AGPSO00116 658 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 CETN3O15182 167 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 RASSF9O75901 435 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 NAT1P18440 290 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 MCM3P25205 808 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 SHMT1P34896 483 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 LRRC63Q05C16 580 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 PPP1R7Q15435 360 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 KLHDC7AQ5VTJ3 777 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 B4GALNT4Q76KP1 1039 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 TAF4BQ92750 862 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 ANO3Q9BYT9 981 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 STIM2Q9P246 746 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 FAM184BQ9ULE4 1060 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 DDTLA6NHG4 134 aaPredicted RBP11.63□□□□□ -0.55
CDH1-214ENST00000621016 PPEF1O14829 653 aaPredicted RBP11.63□□□□□ -0.55
CDH1-214ENST00000621016 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDH1-214ENST00000621016 PTK2Q05397 1052 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 ASIC2Q16515 512 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 CERKLQ49MI3 558 aaPredicted RBP11.63□□□□□ -0.55
CDH1-214ENST00000621016 CFAP221Q4G0U5 840 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 ACBD5Q5T8D3 534 aaPredicted RBP11.63□□□□□ -0.55
CDH1-214ENST00000621016 CCDC174Q6PII3 467 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 CATSPER3Q86XQ3 398 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 OR2W6PQ8NHA6 318 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 CENPOQ9BU64 300 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 ATP6V0A4Q9HBG4 840 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 RIC8AQ9NPQ8 531 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 ROBO1Q9Y6N7 1651 aa11.63□□□□□ -0.55
CDH1-214ENST00000621016 IRS2Q9Y4H2 1338 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 HSF2BPO75031 334 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 ANP32DO95626 131 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 COPB2P35606 906 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 CTCFP49711 727 aaPredicted RBP11.62□□□□□ -0.55
CDH1-214ENST00000621016 PPFIA1Q13136 1202 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 ZRSR2Q15696 482 aaKnown RBP11.62□□□□□ -0.55
CDH1-214ENST00000621016 ZC2HC1CQ53FD0 456 aaPredicted RBP11.62□□□□□ -0.55
CDH1-214ENST00000621016 VCPKMTQ9H867 229 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 ARMCX3Q9UH62 379 aaPredicted RBP11.62□□□□□ -0.55
CDH1-214ENST00000621016 ANO9A1A5B4 782 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 NOL4O94818 638 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 PDHA1P08559 390 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 TCP1P17987 556 aaKnown RBP11.62□□□□□ -0.55
CDH1-214ENST00000621016 CYP11B2P19099 503 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 MAGEA8P43361 318 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 CYP2J2P51589 502 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 TUBB4BP68371 445 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 ARHGAP44Q17R89 818 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 HGSNATQ68CP4 663 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 HAUS3Q68CZ6 603 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 DYDC1Q8WWB3 177 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 HDAC9Q9UKV0 1011 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 DNM3Q9UQ16 869 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 ABCA3Q99758 1704 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 GRIN2DO15399 1336 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 E7EVH7 732 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 RNF8O76064 485 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 GFPT2O94808 682 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 ARHGAP4P98171 946 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 TEKT1Q969V4 418 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 ELMO3Q96BJ8 720 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 P2RX7Q99572 595 aaKnown RBP11.62□□□□□ -0.55
CDH1-214ENST00000621016 REEP2Q9BRK0 252 aa11.62□□□□□ -0.55
CDH1-214ENST00000621016 DNAAF2Q9NVR5 837 aaKnown RBP11.62□□□□□ -0.55
CDH1-214ENST00000621016 PLCH1Q4KWH8 1693 aa11.61□□□□□ -0.55
CDH1-214ENST00000621016 TOM1O60784 492 aa11.61□□□□□ -0.55
CDH1-214ENST00000621016 BBOX1O75936 387 aa11.61□□□□□ -0.55
CDH1-214ENST00000621016 IL1R1P14778 569 aa11.61□□□□□ -0.55
CDH1-214ENST00000621016 PDIA5Q14554 519 aa11.61□□□□□ -0.55
CDH1-214ENST00000621016 CWF19L1Q69YN2 538 aaKnown RBP11.61□□□□□ -0.55
CDH1-214ENST00000621016 C14orf80Q86SX3 495 aa11.61□□□□□ -0.55
CDH1-214ENST00000621016 CCDC50Q8IVM0 306 aa11.61□□□□□ -0.55
CDH1-214ENST00000621016 FNBP4Q8N3X1 1017 aaPredicted RBP11.61□□□□□ -0.55
CDH1-214ENST00000621016 U2AF1L4Q8WU68 220 aaKnown RBP11.61□□□□□ -0.55
CDH1-214ENST00000621016 UBE2OQ9C0C9 1292 aaKnown RBP11.61□□□□□ -0.55
CDH1-214ENST00000621016 DDX47Q9H0S4 455 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms