RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RNPEPQ9H4A4 650 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 TUT1Q9H6E5 874 aaKnown RBP8.92□□□□□ -0.98
CPNE3-209ENST00000620393 PDLIM7Q9NR12 457 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 CYP26B1Q9NR63 512 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 MAN1B1Q9UKM7 699 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 PPME1Q9Y570 386 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 NPHP3-ACAD11A0A0J9YXS1 232 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 ADAMTS4O75173 837 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 DGAT1O75907 488 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 PGK1P00558 417 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 KRT18P05783 430 aaKnown RBP8.91□□□□□ -0.98
CPNE3-209ENST00000620393 MYL3P08590 195 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 C6orf222P0C671 652 aaPredicted RBP8.91□□□□□ -0.98
CPNE3-209ENST00000620393 CCDC192P0DO97 292 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 MARK3P27448 753 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 NLRP12P59046 1061 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 ASIC1P78348 528 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 BEX3Q00994 111 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 PSMD2Q13200 908 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 MORC3Q14149 939 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 MTERF2Q49AM1 385 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 KMT5BQ4FZB7 885 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 ZNF484Q5JVG2 852 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 PLA2G4FQ68DD2 849 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 FBXO46Q6PJ61 603 aaPredicted RBP8.91□□□□□ -0.98
CPNE3-209ENST00000620393 LRSAM1Q6UWE0 723 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 TRIM50Q86XT4 487 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 CCDC65Q8IXS2 484 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 EXOC8Q8IYI6 725 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 SH3TC2Q8TF17 1288 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 KAT2BQ92831 832 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 CCDC43Q96MW1 224 aaKnown RBP8.91□□□□□ -0.98
CPNE3-209ENST00000620393 SH2D3AQ9BRG2 576 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 TIPINQ9BVW5 301 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 GTPBP4Q9BZE4 634 aaKnown RBP8.91□□□□□ -0.98
CPNE3-209ENST00000620393 XPNPEP3Q9NQH7 507 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 PANK4Q9NVE7 773 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 ANO10Q9NW15 660 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 RMND1Q9NWS8 449 aa8.91□□□□□ -0.98
CPNE3-209ENST00000620393 SEPT9Q9UHD8 586 aaPredicted RBP8.91□□□□□ -0.98
CPNE3-209ENST00000620393 ZNF215Q9UL58 517 aaPredicted RBP8.91□□□□□ -0.98
CPNE3-209ENST00000620393 SYNRGQ9UMZ2 1314 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 FRMD3A2A2Y4 597 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 MYADML2A6NDP7 307 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 ZBTB42B2RXF5 422 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 HAS3O00219 553 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 BIN1O00499 593 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 MAFO75444 373 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 RHOBTB3O94955 611 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 F2P00734 622 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 ZNF286BP0CG31 522 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 INSRRP14616 1297 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 IDEP14735 1019 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 GAP43P17677 238 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 BMP6P22004 513 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 CST5P28325 142 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 RFC5P40937 340 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 PSEN2P49810 448 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 PURAQ00577 322 aaKnown RBP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 TYRO3Q06418 890 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 EHHADHQ08426 723 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 RAD51AP2Q09MP3 1159 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 SLC9C1Q4G0N8 1177 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 HERC4Q5GLZ8 1057 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 ISM2Q6H9L7 571 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 CCSAPQ6IQ19 270 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 RNF180Q86T96 592 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 MLKLQ8NB16 471 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 PCSK9Q8NBP7 692 aaKnown RBP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 MCPH1Q8NEM0 835 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 JPH2Q9BR39 696 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 REEP2Q9BRK0 252 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 TSEN34Q9BSV6 310 aaKnown RBP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 MTG1Q9BT17 334 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 DHX33Q9H6R0 707 aaKnown RBP8.9□□□□□ -0.98
CPNE3-209ENST00000620393 POLD4Q9HCU8 107 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 ODF2LQ9ULJ1 636 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 COL4A3BPQ9Y5P4 624 aa8.9□□□□□ -0.98
CPNE3-209ENST00000620393 PCNTO95613 3336 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 IGKV6-21A0A0C4DH24 114 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 RRN3P2A6NIE6 340 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 SFI1A8K8P3 1242 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 RSPH10B2B2RC85 870 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 MAGEB2O15479 319 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 USO1O60763 962 aaKnown RBP8.89□□□□□ -0.99
CPNE3-209ENST00000620393 HIP1RO75146 1068 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 PPP1R37O75864 691 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 FAM13AO94988 1023 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 RSPH10BP0C881 870 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 ZNF131P52739 623 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 STK4Q13043 487 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 COASYQ13057 564 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 MAPK7Q13164 816 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 MFSD10Q14728 455 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 LRRC41Q15345 812 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 KCNA10Q16322 511 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 STX1AQ16623 288 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 KIAA0753Q2KHM9 967 aa8.89□□□□□ -0.99
CPNE3-209ENST00000620393 CT47A1Q5JQC4 288 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms