RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 BORCS6Q96GS4 357 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 RNF14Q9UBS8 474 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 BZW2Q9Y6E2 419 aaKnown RBP12.23□□□□□ -0.45
TP53-223ENST00000618944 ZMYM2Q9UBW7 1377 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 GOLGA6CA6NDK9 693 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 DDX3XO00571 662 aaKnown RBP eCLIP12.23□□□□□ -0.45
TP53-223ENST00000618944 CEP104O60308 925 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 VIL1P09327 827 aaKnown RBP12.23□□□□□ -0.45
TP53-223ENST00000618944 GOLGA6DP0CG33 693 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 HMGB2P26583 209 aaKnown RBP12.23□□□□□ -0.45
TP53-223ENST00000618944 EPHB4P54760 987 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 PPP2R5CQ13362 524 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 CBWD6Q4V339 395 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 MUM1L1Q5H9M0 696 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 CBWD3Q5JTY5 395 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 CBWD5Q5RIA9 395 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 CHURC1Q8WUH1 139 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 AGBL1Q96MI9 1066 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 INPP4AQ96PE3 977 aaPredicted RBP12.23□□□□□ -0.45
TP53-223ENST00000618944 SH2D3AQ9BRG2 576 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 AP1M1Q9BXS5 423 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 GOLGA6AQ9NYA3 693 aa12.23□□□□□ -0.45
TP53-223ENST00000618944 SLX4Q8IY92 1834 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 FLOT1O75955 427 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 JAM2P57087 298 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 GLE1Q53GS7 698 aaKnown RBP12.22□□□□□ -0.45
TP53-223ENST00000618944 TTC19Q6DKK2 380 aaPredicted RBP12.22□□□□□ -0.45
TP53-223ENST00000618944 RSBN1LQ6PCB5 846 aaPredicted RBP12.22□□□□□ -0.45
TP53-223ENST00000618944 FAM151AQ8WW52 585 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 ARL8AQ96BM9 186 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 NACC1Q96RE7 527 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 FIZ1Q96SL8 496 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 RANBP17Q9H2T7 1088 aaKnown RBP12.22□□□□□ -0.45
TP53-223ENST00000618944 RABEP2Q9H5N1 569 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 ZNF277Q9NRM2 450 aaPredicted RBP12.22□□□□□ -0.45
TP53-223ENST00000618944 LCMT1Q9UIC8 334 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 MRPL11Q9Y3B7 192 aaKnown RBP12.22□□□□□ -0.45
TP53-223ENST00000618944 IPO5O00410 1097 aaKnown RBP12.22□□□□□ -0.45
TP53-223ENST00000618944 RAD51CO43502 376 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 KIF4AO95239 1232 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 C10orf76Q5T2E6 689 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 EMBQ6PCB8 327 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 SYCP3Q8IZU3 236 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 OGFOD1Q8N543 542 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 USP38Q8NB14 1042 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 TPCN2Q8NHX9 752 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 FAM76AQ8TAV0 307 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 CASKIN2Q8WXE0 1202 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 LXNQ9BS40 222 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 PCIF1Q9H4Z3 704 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 GDF3Q9NR23 364 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 AGPAT3Q9NRZ7 376 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 CWC15Q9P013 229 aaKnown RBP12.22□□□□□ -0.45
TP53-223ENST00000618944 DNAJC12Q9UKB3 198 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 FRMD4BQ9Y2L6 1034 aa12.22□□□□□ -0.45
TP53-223ENST00000618944 EIF3DO15371 548 aaKnown RBP eCLIP12.21□□□□□ -0.45
TP53-223ENST00000618944 EVI5O60447 810 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 HSF2BPO75031 334 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 H2AFZP0C0S5 128 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 STAT1P42224 750 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 FMO5P49326 533 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 DRAP1Q14919 205 aaPredicted RBP12.21□□□□□ -0.45
TP53-223ENST00000618944 ARHGAP44Q17R89 818 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 H2AFVQ71UI9 128 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 HS2ST1Q7LGA3 356 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 GLYCTKQ8IVS8 523 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 LARGE2Q8N3Y3 721 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 HOOK2Q96ED9 719 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 CCDC43Q96MW1 224 aaKnown RBP12.21□□□□□ -0.45
TP53-223ENST00000618944 VCPKMTQ9H867 229 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.21□□□□□ -0.45
TP53-223ENST00000618944 SEPT11Q9NVA2 429 aaKnown RBP12.21□□□□□ -0.45
TP53-223ENST00000618944 RSPH14Q9UHP6 348 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.45
TP53-223ENST00000618944 ARHGEF35A5YM69 484 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 TISP43B9A030 160 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 PPP1R12BO60237 982 aaPredicted RBP12.21□□□□□ -0.46
TP53-223ENST00000618944 HIP1RO75146 1068 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 ITGB5P18084 799 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 ABCB4P21439 1286 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 PRKCIP41743 596 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 KCTD16Q68DU8 428 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 DAAM2Q86T65 1068 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 VPS36Q86VN1 386 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 CPXCR1Q8N123 301 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 LRRC57Q8N9N7 239 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 LNX1Q8TBB1 728 aaPredicted RBP12.21□□□□□ -0.46
TP53-223ENST00000618944 ZIM3Q96PE6 472 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 RUFY1Q96T51 708 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 TEKT3Q9BXF9 490 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 WDR11Q9BZH6 1224 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 OSGEPQ9NPF4 335 aa12.21□□□□□ -0.46
TP53-223ENST00000618944 BTNL10A8MVZ5 291 aa12.2□□□□□ -0.46
TP53-223ENST00000618944 EXOC3O60645 756 aa12.2□□□□□ -0.46
TP53-223ENST00000618944 KRT14P02533 472 aa12.2□□□□□ -0.46
TP53-223ENST00000618944 INPP5BP32019 993 aa12.2□□□□□ -0.46
TP53-223ENST00000618944 GALCP54803 685 aa12.2□□□□□ -0.46
TP53-223ENST00000618944 TRAF1Q13077 416 aa12.2□□□□□ -0.46
TP53-223ENST00000618944 DGKZQ13574 1117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms