RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 ZSWIM4Q9H7M6 989 aa19.25■□□□□ 0.67
CNOT3-209ENST00000617930 TYW1Q9NV66 732 aaKnown RBP19.25■□□□□ 0.67
CNOT3-209ENST00000617930 FAM53CQ9NYF3 392 aa19.25■□□□□ 0.67
CNOT3-209ENST00000617930 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.25■□□□□ 0.67
CNOT3-209ENST00000617930 TRPM7Q96QT4 1865 aa19.25■□□□□ 0.67
CNOT3-209ENST00000617930 NR3C1P04150 777 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 KCNH2Q12809 1159 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 SNAPC2Q13487 334 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 RIOX2Q8IUF8 465 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 BORCS6Q96GS4 357 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 TBC1D22BQ9NU19 505 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 CDK17Q00537 523 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 CYP27A1Q02318 531 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 RRAGAQ7L523 313 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 NEK9Q8TD19 979 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 INPP4AQ96PE3 977 aaPredicted RBP19.24■□□□□ 0.67
CNOT3-209ENST00000617930 LACRTQ9GZZ8 138 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 PNMA2Q9UL42 364 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 SAMM50Q9Y512 469 aa19.24■□□□□ 0.67
CNOT3-209ENST00000617930 KIAA1217Q5T5P2 1943 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 ARHGEF35A5YM69 484 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 BTBD19C9JJ37 291 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 EIF3DO15371 548 aaKnown RBP eCLIP19.23■□□□□ 0.67
CNOT3-209ENST00000617930 TLR2O60603 784 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 PPP1R37O75864 691 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 LYPLA2O95372 231 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 QARSP47897 775 aaKnown RBP19.23■□□□□ 0.67
CNOT3-209ENST00000617930 ZNF569Q5MCW4 686 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 ODR4Q5SWX8 454 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 TMCO3Q6UWJ1 677 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 TRMT1LQ7Z2T5 733 aaKnown RBP19.23■□□□□ 0.67
CNOT3-209ENST00000617930 SLC35F6Q8N357 371 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 KCND2Q9NZV8 630 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 ODF2LQ9ULJ1 636 aa19.23■□□□□ 0.67
CNOT3-209ENST00000617930 DOCK5Q9H7D0 1870 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 CALUO43852 315 aaPredicted RBP19.22■□□□□ 0.67
CNOT3-209ENST00000617930 TFRCP02786 760 aaKnown RBP19.22■□□□□ 0.67
CNOT3-209ENST00000617930 FKBP1BP68106 108 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 HGSNATQ68CP4 663 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 FASTKD5Q7L8L6 764 aaKnown RBP19.22■□□□□ 0.67
CNOT3-209ENST00000617930 FRMD5Q7Z6J6 570 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 PTPN18Q99952 460 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 MRFAP1Q9Y605 127 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 DUSP10Q9Y6W6 482 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 BACH1O14867 736 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 KCNA2P16389 499 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 YWHABP31946 246 aaKnown RBP19.22■□□□□ 0.67
CNOT3-209ENST00000617930 PPP2R3AQ06190 1150 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 TSR1Q2NL82 804 aaKnown RBP19.22■□□□□ 0.67
CNOT3-209ENST00000617930 SPRYD7Q5W111 196 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 CHADLQ6NUI6 762 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 PDXDC1Q6P996 788 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 FAM178BQ8IXR5 827 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 C2orf69Q8N8R5 385 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 LSM14BQ9BX40 385 aaKnown RBP19.22■□□□□ 0.67
CNOT3-209ENST00000617930 NLRC4Q9NPP4 1024 aa19.22■□□□□ 0.67
CNOT3-209ENST00000617930 DBR1Q9UK59 544 aaKnown RBP19.22■□□□□ 0.67
CNOT3-209ENST00000617930 LRRC37A2A6NM11 1700 aa19.21■□□□□ 0.67
CNOT3-209ENST00000617930 UNCXA6NJT0 531 aa19.21■□□□□ 0.67
CNOT3-209ENST00000617930 EIF3CLB5ME19 914 aaKnown RBP19.21■□□□□ 0.67
CNOT3-209ENST00000617930 ACTN1P12814 892 aa19.21■□□□□ 0.67
CNOT3-209ENST00000617930 NPEPPSP55786 919 aa19.21■□□□□ 0.67
CNOT3-209ENST00000617930 CHST13Q8NET6 341 aa19.21■□□□□ 0.67
CNOT3-209ENST00000617930 NEK11Q8NG66 645 aa19.21■□□□□ 0.67
CNOT3-209ENST00000617930 SLC35C1Q96A29 364 aa19.21■□□□□ 0.67
CNOT3-209ENST00000617930 EIF3CQ99613 913 aaKnown RBP19.21■□□□□ 0.67
CNOT3-209ENST00000617930 GANQ9H2C0 597 aa19.21■□□□□ 0.67
CNOT3-209ENST00000617930 GPRC5CQ9NQ84 441 aa19.21■□□□□ 0.67
CNOT3-209ENST00000617930 ARMCX3Q9UH62 379 aaPredicted RBP19.21■□□□□ 0.67
CNOT3-209ENST00000617930 CCL15-CCL14A0A0B4J2E2 113 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 KIF5CO60282 957 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 STBD1O95210 358 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 SLC9A1P19634 815 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 CCND2P30279 289 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 CCL15Q16663 113 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 ASTE1Q2TB18 679 aaPredicted RBP19.2■□□□□ 0.66
CNOT3-209ENST00000617930 PLA2G4FQ68DD2 849 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 NCAPG2Q86XI2 1143 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 CCDC170Q8IYT3 715 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 NSUN6Q8TEA1 469 aaKnown RBP19.2■□□□□ 0.66
CNOT3-209ENST00000617930 IQCDQ96DY2 449 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 FGD4Q96M96 766 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 SEL1LQ9UBV2 794 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 FAM184BQ9ULE4 1060 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 TISP43B9A030 160 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 ZNF862O60290 1169 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 EIF4A3P38919 411 aaKnown RBP19.2■□□□□ 0.66
CNOT3-209ENST00000617930 SP2Q02086 613 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 TEX35Q5T0J7 233 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 XRRA1Q6P2D8 792 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 ANO5Q75V66 913 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 C4orf19Q8IY42 314 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 GPRASP2Q96D09 838 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 PORCNQ9H237 461 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 DMAC2Q9NW81 257 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 ZNHIT6Q9NWK9 470 aaKnown RBP19.2■□□□□ 0.66
CNOT3-209ENST00000617930 GUCA1BQ9UMX6 200 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 PCDHB13Q9Y5F0 798 aa19.2■□□□□ 0.66
CNOT3-209ENST00000617930 SOWAHBA6NEL2 793 aa19.19■□□□□ 0.66
CNOT3-209ENST00000617930 PDHXO00330 501 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms