RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	CAPN7	Q9Y6W3	813 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	RFX7	Q2KHR2	1363 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	STK36	Q9NRP7	1315 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	CLDN3	O15551	220 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	KRT37	O76014	449 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	IFNAR1	P17181	557 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	UBE2S	Q16763	222 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	RCSD1	Q6JBY9	416 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	RNF168	Q8IYW5	571 aa	Predicted RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	PROM2	Q8N271	834 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	PBXIP1	Q96AQ6	731 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	EDC3	Q96F86	508 aa	Known RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	LBHD1	Q9BQE6	289 aa	Predicted RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	DESI2	Q9BSY9	194 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	WDR19	Q8NEZ3	1342 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	MIF4GD	A9UHW6	222 aa	Known RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	USP17L10	C9JJH3	530 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	MEIS1	O00470	390 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	ASAP2	O43150	1006 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	BNIP3L	O60238	219 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	KDM1A	O60341	852 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	CYP2E1	P05181	493 aa	Predicted RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	MMP10	P09238	476 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	DR1	Q01658	176 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	ZBTB17	Q13105	803 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	LAMB3	Q13751	1172 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	CTTN	Q14247	550 aa	Known RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	MXD4	Q14582	209 aa	Predicted RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	EFHC2	Q5JST6	749 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	ACAD11	Q709F0	780 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	SYNE4	Q8N205	404 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	RAET1E	Q8TD07	263 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	OTUB1	Q96FW1	271 aa	Predicted RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	PPP1R2P1	Q96PQ5	205 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	PPP1R16B	Q96T49	567 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	PUS3	Q9BZE2	481 aa	Known RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	LSM7	Q9UK45	103 aa	Known RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	INPP5F	Q9Y2H2	1132 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	COL15A1	P39059	1388 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	UBE4B	O95155	1302 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	EXOC1L	A0A1B0GW35	172 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	GOLGA8J	A6NMD2	632 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271		H3BRJ5	948 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	SLC26A4	O43511	780 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	TRAPPC3	O43617	180 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	COBL	O75128	1261 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	LRRN2	O75325	713 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	ANP32D	O95626	131 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	SMARCA1	P28370	1054 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	LTK	P29376	864 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	LIFR	P42702	1097 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	KIF23	Q02241	960 aa	Predicted RBP	7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	ANGPTL8	Q6UXH0	198 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	RABGGTA	Q92696	567 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	FAM20A	Q96MK3	541 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	WRNIP1	Q96S55	665 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	ZWILCH	Q9H900	591 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	SEC31B	Q9NQW1	1179 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	RNF181	Q9P0P0	153 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	TRIM33	Q9UPN9	1127 aa		7.88	□□□□□ -1.15
PCDH15-231	ENST00000617271	SYNGAP1	Q96PV0	1343 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	USP17L15	C9J2P7	530 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	USP17L13	C9JLJ4	530 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	USP17L11	C9JVI0	530 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	USP17L18	D6R9N7	530 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	USP17L22	D6RA61	530 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	USP17L17	D6RBQ6	530 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	USP17L19	D6RCP7	530 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	USP17L20	D6RJB6	530 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271		E5RI56	91 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	STXBP3	O00186	592 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	PODXL	O00592	558 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	PER1	O15534	1290 aa	Predicted RBP	7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	IGSF3	O75054	1194 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	ALDH1A1	P00352	501 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	RBL2	Q08999	1139 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	USP17L24	Q0WX57	530 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	FAM83B	Q5T0W9	1011 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	TRIM72	Q6ZMU5	477 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	ENOSF1	Q7L5Y1	443 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	SCN4B	Q8IWT1	228 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	PYROXD1	Q8WU10	500 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	NCLN	Q969V3	563 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	POLR3C	Q9BUI4	534 aa	Predicted RBP	7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	PLEKHA4	Q9H4M7	779 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	ERVK-7	P63135	1459 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	GRIN3B	O60391	1043 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	CSPG5	O95196	566 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	PLCG1	P19174	1290 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	MED21	Q13503	144 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	C6orf118	Q5T5N4	469 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	UNC13D	Q70J99	1090 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	RASSF3	Q86WH2	238 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	CRLF3	Q8IUI8	442 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	RASEF	Q8IZ41	740 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	MB21D1	Q8N884	522 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	SEL1L	Q9UBV2	794 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	NARF	Q9UHQ1	456 aa		7.87	□□□□□ -1.15
PCDH15-231	ENST00000617271	NFU1	Q9UMS0	254 aa		7.87	□□□□□ -1.15

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