RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	OAS1	P00973	400 aa	Known RBP	12.52	□□□□□ -0.41
TP53-222	ENST00000617185	SHBG	P04278	402 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	MMP13	P45452	471 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	CACNA2D1	P54289	1103 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	MCL1	Q07820	350 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	RASIP1	Q5U651	963 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	ENDOV	Q8N8Q3	282 aa	Known RBP	12.52	□□□□□ -0.41
TP53-222	ENST00000617185	UCMA	Q8WVF2	138 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	PPP1R14B	Q96C90	147 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	SELENOS	Q9BQE4	189 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	RHBDL2	Q9NX52	303 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	MCM9	Q9NXL9	1143 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	PAIP2B	Q9ULR5	123 aa	Known RBP	12.52	□□□□□ -0.41
TP53-222	ENST00000617185	SRCAP	Q6ZRS2	3230 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	DOCK2	Q92608	1830 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185		O00370	1275 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	CEP104	O60308	925 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	SRGN	P10124	158 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	CCNB1	P14635	433 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	PTDSS1	P48651	473 aa	Known RBP	12.52	□□□□□ -0.41
TP53-222	ENST00000617185	USP46	P62068	366 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	PARP6	Q2NL67	630 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	SLC44A5	Q8NCS7	719 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	ATP8B4	Q8TF62	1192 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	ESR2	Q92731	530 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	SLC35B4	Q969S0	331 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	RXFP1	Q9HBX9	757 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.52	□□□□□ -0.41
TP53-222	ENST00000617185	SPATA7	Q9P0W8	599 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	SAP30BP	Q9UHR5	308 aa	Known RBP	12.52	□□□□□ -0.41
TP53-222	ENST00000617185	BCOR	Q6W2J9	1755 aa		12.52	□□□□□ -0.41
TP53-222	ENST00000617185	CASZ1	Q86V15	1759 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	WDR19	Q8NEZ3	1342 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	RREB1	Q92766	1687 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185		A0A087X0B3	334 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	MAGEA13P	A6NCF6	341 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	SKI	P12755	728 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	POLD1	P28340	1107 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	CBX3	Q13185	183 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	IFIT1B	Q5T764	474 aa	Known RBP	12.51	□□□□□ -0.41
TP53-222	ENST00000617185	RC3H1	Q5TC82	1133 aa	Known RBP	12.51	□□□□□ -0.41
TP53-222	ENST00000617185	PRR5L	Q6MZQ0	368 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	IRF2BP1	Q8IU81	584 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.51	□□□□□ -0.41
TP53-222	ENST00000617185	WDR66	Q8TBY9	1149 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	DDX27	Q96GQ7	796 aa	Known RBP	12.51	□□□□□ -0.41
TP53-222	ENST00000617185	PRMT1	Q99873	361 aa	Known RBP	12.51	□□□□□ -0.41
TP53-222	ENST00000617185	QTRT2	Q9H974	415 aa	Known RBP	12.51	□□□□□ -0.41
TP53-222	ENST00000617185	CD2AP	Q9Y5K6	639 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	LCA5L	O95447	670 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	KCNA3	P22001	575 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	PAX3	P23760	479 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	EARS2	Q5JPH6	523 aa	Known RBP	12.51	□□□□□ -0.41
TP53-222	ENST00000617185	CHADL	Q6NUI6	762 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	KLHL7	Q8IXQ5	586 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	SLC17A8	Q8NDX2	589 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	NUDCD1	Q96RS6	583 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.51	□□□□□ -0.41
TP53-222	ENST00000617185	EXOC1	Q9NV70	894 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185	RMND1	Q9NWS8	449 aa		12.51	□□□□□ -0.41
TP53-222	ENST00000617185		V9GY48	417 aa	Predicted RBP	12.51	□□□□□ -0.41
TP53-222	ENST00000617185	CHD4	Q14839	1912 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	CACNA1S	Q13698	1873 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	LAMB2	P55268	1798 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185		F8VZ95	297 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	NVL	O15381	856 aa	Known RBP	12.5	□□□□□ -0.41
TP53-222	ENST00000617185	PJA2	O43164	708 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	KIF11	P52732	1056 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	CNPY1	Q3B7I2	92 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	TMC3	Q7Z5M5	1100 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.5	□□□□□ -0.41
TP53-222	ENST00000617185	AGAP3	Q96P47	875 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	UNC45A	Q9H3U1	944 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	RNF41	Q9H4P4	317 aa	Predicted RBP	12.5	□□□□□ -0.41
TP53-222	ENST00000617185	PCDH18	Q9HCL0	1135 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	CABP5	Q9NP86	173 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	TUBGCP4	Q9UGJ1	667 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	TRIM33	Q9UPN9	1127 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	PCDHB6	Q9Y5E3	794 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	COMMD3-BMI1	R4GMX3	469 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.5	□□□□□ -0.41
TP53-222	ENST00000617185		A0A1W2PQJ5	194 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	WNT7A	O00755	349 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	RIMBP2	O15034	1052 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	ADAMTS3	O15072	1205 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	IFNAR1	P17181	557 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	YY1	P25490	414 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	GPSM2	P81274	684 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	LSAMP	Q13449	338 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	RCN2	Q14257	317 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	SEC23A	Q15436	765 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	SEPT14	Q6ZU15	432 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	CCDC80	Q76M96	950 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	TRIM22	Q8IYM9	498 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.5	□□□□□ -0.41
TP53-222	ENST00000617185	SH3TC2	Q8TF17	1288 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	RPGR	Q92834	1020 aa	Known RBP	12.5	□□□□□ -0.41
TP53-222	ENST00000617185	HIC2	Q96JB3	615 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	ZNF333	Q96JL9	665 aa		12.5	□□□□□ -0.41
TP53-222	ENST00000617185	HAPLN3	Q96S86	360 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms