RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 CNGA2Q16280 664 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 SLC18A3Q16572 532 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 LONRF1Q17RB8 773 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 TCERG1LQ5VWI1 586 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 APLFQ8IW19 511 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 SCFD2Q8WU76 684 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 PITPNM3Q9BZ71 974 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 RNF41Q9H4P4 317 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 SLITRK6Q9H5Y7 841 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 SEPT11Q9NVA2 429 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 ARPP21Q9UBL0 812 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 ATP6V0A2Q9Y487 856 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 LMO7Q8WWI1 1683 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 PHRF1Q9P1Y6 1649 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 GNAQP50148 359 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 AMPD3Q01432 767 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 CABP7Q86V35 215 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 RBBP8NLQ8NC74 664 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 ESR2Q92731 530 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 STMN2Q93045 179 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 RASAL2Q9UJF2 1139 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 GPR75-ASB3A0A0A6YYF3 556 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 ZSCAN9O15535 394 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 UNC5CO95185 931 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 FAM200BP0CF97 657 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 MAGEA8P43361 318 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 MCL1Q07820 350 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 ZNF211Q13398 564 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 IRGCQ6NXR0 463 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 EIF1ADQ8N9N8 165 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 PGM2Q96G03 612 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 RMI1Q9H9A7 625 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 ASB3Q9Y575 518 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 ABCC12Q96J65 1359 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 FOXO6A8MYZ6 492 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 KLRC4O43908 158 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 PDE8AO60658 829 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 PEX11AO75192 247 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 LCA5LO95447 670 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 MKRN4PQ13434 485 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 PKN1Q16512 942 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 BARGINQ6ZT62 677 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 MIGA2Q7L4E1 593 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 RNF168Q8IYW5 571 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 FAM13CQ8NE31 585 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 BAP1Q92560 729 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 HIC2Q96JB3 615 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 LRRC37BQ96QE4 947 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 CARD9Q9H257 536 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 EPB41L4AQ9HCS5 686 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 CHMP2BQ9UQN3 213 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 STRCQ7RTU9 1775 aa11.19□□□□□ -0.62
TNFAIP3-208ENST00000615468 A0A1W2PRG0 241 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 CCDC160A6NGH7 325 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 ABLIM1O14639 778 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 BCAMP50895 628 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 NAALADL2Q58DX5 795 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 SNRNP27Q8WVK2 155 aaKnown RBP11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 SHISA4Q96DD7 197 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 DMAP1Q9NPF5 467 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 DNAJC17Q9NVM6 304 aaKnown RBP11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 NMRK1Q9NWW6 199 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 CCNL1Q9UK58 526 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 ZNF232Q9UNY5 417 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 GSTA2P09210 222 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 IL6STP40189 918 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 RASSF2P50749 326 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 PDIA5Q14554 519 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 INF2Q27J81 1249 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 SGSM1Q2NKQ1 1148 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 CCDC152Q4G0S7 254 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 SNX30Q5VWJ9 437 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 RFX8Q6ZV50 586 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 PHC3Q8NDX5 983 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 ACTRT1Q8TDG2 376 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 GPKOWQ92917 476 aaPredicted RBP eCLIP11.18□□□□□ -0.622e-6■■■■■ 37.1
TNFAIP3-208ENST00000615468 ADAM7Q9H2U9 754 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 SEMA6BQ9H3T3 888 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 ZHX3Q9H4I2 956 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 LRP2BPQ9P2M1 347 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 LRCH1Q9Y2L9 728 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 PRPF3O43395 683 aaKnown RBP11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 MYBP10242 640 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 ACADSP16219 412 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 CREB1P16220 341 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 VHLP40337 213 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 RCN1Q15293 331 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 LLGL1Q15334 1064 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 UBE3CQ15386 1083 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 DIXDC1Q155Q3 683 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 OLFML2BQ68BL8 750 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 ALKBH5Q6P6C2 394 aaKnown RBP11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 HS2ST1Q7LGA3 356 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 ZSCAN29Q8IWY8 852 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 AGGF1Q8N302 714 aaeCLIP11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 ANAPC4Q9UJX5 808 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms