RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 EHMT1Q9H9B1 1298 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 RMND1Q9NWS8 449 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 GRIN2DO15399 1336 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 LRRC10BA6NIK2 292 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 FECHP22830 423 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 SREBF1P36956 1147 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 ACTN3Q08043 901 aaPredicted RBP14.31□□□□□ -0.12
FOXN3-219ENST00000615335 NAA25Q14CX7 972 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 IL17AQ16552 155 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 ZNF569Q5MCW4 686 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 CAPNS2Q96L46 248 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 CYP39A1Q9NYL5 469 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 DDX20Q9UHI6 824 aaKnown RBP14.31□□□□□ -0.12
FOXN3-219ENST00000615335 A0A0U1RQJ8 604 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 GOLGA6L7A0A1B0GV03 622 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 CTAGE9A4FU28 777 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 ZEB2O60315 1214 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 TDP2O95551 362 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 USP11P51784 963 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 COPB1P53618 953 aaKnown RBP14.31□□□□□ -0.12
FOXN3-219ENST00000615335 GNGT1P63211 74 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 CCNA1P78396 465 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 SLC5A9Q2M3M2 681 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 ZNF658Q5TYW1 1059 aaPredicted RBP14.31□□□□□ -0.12
FOXN3-219ENST00000615335 ARL6IP4Q66PJ3 421 aaKnown RBP14.31□□□□□ -0.12
FOXN3-219ENST00000615335 TMTC1Q8IUR5 882 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 NELFBQ8WX92 580 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 ATRIPQ8WXE1 791 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 PURBQ96QR8 312 aaKnown RBP14.31□□□□□ -0.12
FOXN3-219ENST00000615335 MTRQ99707 1265 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 VPS16Q9H269 839 aa14.31□□□□□ -0.12
FOXN3-219ENST00000615335 GOLGA8KD6RF30 607 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 EDIL3O43854 480 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 AOC2O75106 756 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 COQ9O75208 318 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 GBP2P32456 591 aaPredicted RBP14.3□□□□□ -0.12
FOXN3-219ENST00000615335 COPB2P35606 906 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 ZNF76P36508 570 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 LONP1P36776 959 aaKnown RBP14.3□□□□□ -0.12
FOXN3-219ENST00000615335 TM4SF4P48230 202 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 IFFO1Q0D2I5 559 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 TRIM14Q14142 442 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 TAAR1Q96RJ0 339 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 RMDN3Q96TC7 470 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 PORCNQ9H237 461 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 R3HDMLQ9H3Y0 253 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 MROH8Q9H579 483 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 TAB2Q9NYJ8 693 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 KCNJ18B7U540 433 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 NDUFAB1O14561 156 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 CAND2O75155 1236 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 RPN1P04843 607 aaKnown RBP14.3□□□□□ -0.12
FOXN3-219ENST00000615335 KCNJ12Q14500 433 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 TCP11X2Q5H9J9 407 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 CDCA2Q69YH5 1023 aaPredicted RBP14.3□□□□□ -0.12
FOXN3-219ENST00000615335 PPP4R3AQ6IN85 833 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 KLHL23Q8NBE8 558 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 CRYGNQ8WXF5 182 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 ACTR5Q9H9F9 607 aaPredicted RBP14.3□□□□□ -0.12
FOXN3-219ENST00000615335 KIF9Q9HAQ2 790 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 DDX25Q9UHL0 483 aaKnown RBP14.3□□□□□ -0.12
FOXN3-219ENST00000615335 CPA4Q9UI42 421 aa14.3□□□□□ -0.12
FOXN3-219ENST00000615335 EIF2AK2P19525 551 aaKnown RBP14.29□□□□□ -0.12
FOXN3-219ENST00000615335 HTRA3P83110 453 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 ARHGEF16Q5VV41 709 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 CYP26C1Q6V0L0 522 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 CEP57Q86XR8 500 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 PARP9Q8IXQ6 854 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 ACRBPQ8NEB7 543 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 NAP1L4Q99733 375 aaKnown RBP14.29□□□□□ -0.12
FOXN3-219ENST00000615335 SH3GL2Q99962 352 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 ABHD10Q9NUJ1 306 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 MORF4L1Q9UBU8 362 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 PFASO15067 1338 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 SLC37A4O43826 429 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 STAT6P42226 847 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 SKOR1P84550 965 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 KCTD2Q14681 263 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 FAM110CQ1W6H9 321 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 MAF1Q9H063 256 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 ZFYVE28Q9HCC9 887 aa14.29□□□□□ -0.12
FOXN3-219ENST00000615335 TARSL2A2RTX5 802 aaKnown RBP14.28□□□□□ -0.12
FOXN3-219ENST00000615335 GGCXP38435 758 aa14.28□□□□□ -0.12
FOXN3-219ENST00000615335 ORC2Q13416 577 aaPredicted RBP14.28□□□□□ -0.12
FOXN3-219ENST00000615335 SLC35F6Q8N357 371 aa14.28□□□□□ -0.12
FOXN3-219ENST00000615335 C4orf32Q8N8J7 132 aa14.28□□□□□ -0.12
FOXN3-219ENST00000615335 DRAXINQ8NBI3 349 aaPredicted RBP14.28□□□□□ -0.12
FOXN3-219ENST00000615335 SHCBP1Q8NEM2 672 aa14.28□□□□□ -0.12
FOXN3-219ENST00000615335 TMEM60Q9H2L4 133 aa14.28□□□□□ -0.12
FOXN3-219ENST00000615335 SLC40A1Q9NP59 571 aa14.28□□□□□ -0.12
FOXN3-219ENST00000615335 PXMP2Q9NR77 195 aa14.28□□□□□ -0.12
FOXN3-219ENST00000615335 GDAQ9Y2T3 454 aa14.28□□□□□ -0.12
FOXN3-219ENST00000615335 RPS6KL1Q9Y6S9 549 aa14.28□□□□□ -0.12
FOXN3-219ENST00000615335 EME2A4GXA9 379 aaPredicted RBP14.27□□□□□ -0.12
FOXN3-219ENST00000615335 FAM86B1E9PN63 330 aa14.27□□□□□ -0.12
FOXN3-219ENST00000615335 LAD1O00515 517 aa14.27□□□□□ -0.12
FOXN3-219ENST00000615335 MARCH6O60337 910 aa14.27□□□□□ -0.12
FOXN3-219ENST00000615335 TLR2O60603 784 aa14.27□□□□□ -0.12
FOXN3-219ENST00000615335 ECM2O94769 699 aaPredicted RBP14.27□□□□□ -0.12
FOXN3-219ENST00000615335 CYP3A4P08684 503 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms