RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SIK3Q9Y2K2 1263 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 REXO2Q9Y3B8 237 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 A0A1W2PQC6 194 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 RCCD1A6NED2 376 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 AKR1B10O60218 316 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 ARIH2O95376 493 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 GGPS1O95749 300 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 EPB41P11171 864 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 HARSP12081 509 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 CASQ1P31415 396 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 EIF4A3P38919 411 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 ALDH5A1P51649 535 aaPredicted RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 DLG4P78352 724 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 KRT76Q01546 638 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 PRKCEQ02156 737 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 KCTD2Q14681 263 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 GNPTABQ3T906 1256 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 EPM2AIP1Q7L775 607 aaPredicted RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 HS2ST1Q7LGA3 356 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 HAUS6Q7Z4H7 955 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 TRIM59Q8IWR1 403 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 FAM186BQ8IYM0 893 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 FAM133AQ8N9E0 248 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 BSNDQ8WZ55 320 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 PRIMPOLQ96LW4 560 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 POP1Q99575 1024 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 LACRTQ9GZZ8 138 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 NMRK2Q9NPI5 230 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 AGPAT3Q9NRZ7 376 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 TYW1Q9NV66 732 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 FRMPD4Q14CM0 1322 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 CCL15-CCL14A0A0B4J2E2 113 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 PDXKO00764 312 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 CNMDO75829 334 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 GAP43P17677 238 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 UBA1P22314 1058 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 OAZ1P54368 228 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 NAP1L1P55209 391 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 ZBED6P86452 979 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 GFPT1Q06210 699 aaPredicted RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 CCL15Q16663 113 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 ARHGAP44Q17R89 818 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 HSDL1Q3SXM5 330 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 SEZ6Q53EL9 994 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 COBLL1Q53SF7 1204 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 CCDC122Q5T0U0 273 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 LMBRD2Q68DH5 695 aaPredicted RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 RIOX2Q8IUF8 465 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 SLC35F6Q8N357 371 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 CHST13Q8NET6 341 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 GLG1Q92896 1179 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 GPRASP2Q96D09 838 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 BICD1Q96G01 975 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 ERGIC2Q96RQ1 377 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 PSMB7Q99436 277 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 CARD6Q9BX69 1037 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 TTYH3Q9C0H2 523 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 ARHGAP20Q9P2F6 1191 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 PUF60Q9UHX1 559 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 AGTPBP1Q9UPW5 1226 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 STK24Q9Y6E0 443 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 SBF1O95248 1867 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 ZMYM2Q9UBW7 1377 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 DENND3A2RUS2 1198 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 IQCA1LA6NCM1 817 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 SPATA31C2B4DYI2 1134 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ANKRD63C9JTQ0 380 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 PDHXO00330 501 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 CXCL11O14625 94 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ZNF263O14978 683 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 KIF5CO60282 957 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 CSDE1O75534 798 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 EIF3JO75822 258 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 NOL4O94818 638 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 IPO7O95373 1038 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 AFPP02771 609 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 PSAPP07602 524 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 GJB1P08034 283 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ATP4AP20648 1035 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 RPL13P26373 211 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 NPTX2P47972 431 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 GCLMP48507 274 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 JAK3P52333 1124 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 IGBP1P78318 339 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 DRP2Q13474 957 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 TRIM14Q14142 442 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 EXOC3L4Q17RC7 722 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ERCC6LQ2NKX8 1250 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 CBWD6Q4V339 395 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 CBWD3Q5JTY5 395 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 CBWD5Q5RIA9 395 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 GPAT2Q6NUI2 795 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 NIPA1Q7RTP0 329 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 C4orf19Q8IY42 314 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 TRAPPC12Q8WVT3 735 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 L3MBTL3Q96JM7 780 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 CEP63Q96MT8 703 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 SPAG5Q96R06 1193 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 MMP19Q99542 508 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 DNAJC7Q99615 494 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms