RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CNOT4O95628 575 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 CD40P25942 277 aa7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 KCNQ1P51787 676 aa7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 DHCR24Q15392 516 aa7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 TRIM68Q6AZZ1 485 aa7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 RNF180Q86T96 592 aa7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 PHYKPLQ8IUZ5 450 aa7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 C7orf31Q8N865 590 aa7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 LEO1Q8WVC0 666 aaPredicted RBP7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 TMX1Q9H3N1 280 aa7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 ZNF536O15090 1300 aa7.2□□□□□ -1.26
SCAMP1-205ENST00000614488 STAT3P40763 770 aa7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 RGS3P49796 1198 aa7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 PHC1P78364 1004 aa7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 SMAD3P84022 425 aaKnown RBP7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 PLP2Q04941 152 aa7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 SLFN13Q68D06 897 aa7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 GPR101Q96P66 508 aaPredicted RBP7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 TUBGCP5Q96RT8 1024 aa7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 SSBP3Q9BWW4 388 aaPredicted RBP7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 USP36Q9P275 1121 aaKnown RBP7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 PTPN22Q9Y2R2 807 aa7.19□□□□□ -1.26
SCAMP1-205ENST00000614488 B8ZZF3 427 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 K7ESM1 405 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 TGM5O43548 720 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 FKBP9O95302 570 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 SOX5P35711 763 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 ADCYAP1R1P41586 468 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 BCAR1P56945 870 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 IL2P60568 153 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 MYBPC3Q14896 1274 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 PRAMEF9Q5VWM5 478 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 FKBP9P1Q75LS8 142 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 C11orf74Q86VG3 221 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 OR5AN1Q8NGI8 311 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 RPGRQ92834 1020 aaKnown RBP7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 MEGF9Q9H1U4 602 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 CAAP1Q9H8G2 361 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 PPP4R1LQ9P1A2 415 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 CDC42EP3Q9UKI2 254 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 VWA7Q9Y334 891 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 PRKAB1Q9Y478 270 aa7.18□□□□□ -1.26
SCAMP1-205ENST00000614488 BPIP17213 487 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 MASP1P48740 699 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 MEOX1P50221 254 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 RRADP55042 308 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 NFYCQ13952 458 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 AGBL4Q5VU57 503 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 EGFLAMQ63HQ2 1017 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 TIGD7Q6NT04 549 aaPredicted RBP7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 GLB1LQ6UWU2 654 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 LARP4Q71RC2 724 aaKnown RBP eCLIP7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 KANSL1Q7Z3B3 1105 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 RTKN2Q8IZC4 609 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 BCL6BQ8N143 479 aaPredicted RBP7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 TTC9BQ8N6N2 239 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 RTF1Q92541 710 aaKnown RBP7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 MSL2Q9HCI7 577 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 JADE2Q9NQC1 790 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 SPTLC3Q9NUV7 552 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 KCMF1Q9P0J7 381 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 NCANO14594 1321 aa7.17□□□□□ -1.26
SCAMP1-205ENST00000614488 NPEPPSL1A6NEC2 478 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 PRRG2O14669 202 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 MAFGO15525 162 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 LSP1P33241 339 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 SESN2P58004 480 aaPredicted RBP7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 EFEMP1Q12805 493 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 PCOLCEQ15113 449 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 DGKDQ16760 1214 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 DDX46Q7L014 1031 aaKnown RBP7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 BMP8AQ7Z5Y6 402 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 ZNF610Q8N9Z0 462 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 CHAC2Q8WUX2 184 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 USP7Q93009 1102 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 SAMD11Q96NU1 681 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 PITHD1Q9GZP4 211 aaPredicted RBP7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 HAPLN2Q9GZV7 340 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 KIAA1683Q9H0B3 1180 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 OR10A2Q9H208 303 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 EMC7Q9NPA0 242 aa7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 SAE1Q9UBE0 346 aaPredicted RBP7.16□□□□□ -1.26
SCAMP1-205ENST00000614488 ARHGAP6O43182 974 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 ZEB2O60315 1214 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 PRPF6O94906 941 aaKnown RBP7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 VIL1P09327 827 aaKnown RBP7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 MRE11P49959 708 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 STAT5BP51692 787 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 RAC3P60763 192 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 ADCY2Q08462 1091 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 NOLC1Q14978 699 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 TERF2Q15554 542 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 KIAA1841Q6NSI8 718 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 USP30Q70CQ3 517 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 FILIP1Q7Z7B0 1213 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 CIR1Q86X95 450 aaPredicted RBP7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 LPPQ93052 612 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 NEIL1Q96FI4 390 aaPredicted RBP7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 LMF1Q96S06 567 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 POFUT1Q9H488 388 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms