RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 LRRC71Q8N4P6 559 aa14.78□□□□□ -0.04
MDC1-209ENST00000613547 TCP11Q8WWU5 503 aa14.78□□□□□ -0.04
MDC1-209ENST00000613547 WNT8BQ93098 351 aa14.78□□□□□ -0.04
MDC1-209ENST00000613547 ZBTB10Q96DT7 871 aa14.78□□□□□ -0.04
MDC1-209ENST00000613547 IPO9Q96P70 1041 aaKnown RBP14.78□□□□□ -0.04
MDC1-209ENST00000613547 SH2D3AQ9BRG2 576 aa14.78□□□□□ -0.04
MDC1-209ENST00000613547 MMTAG2Q9BU76 263 aaKnown RBP14.78□□□□□ -0.04
MDC1-209ENST00000613547 AKT3Q9Y243 479 aa14.78□□□□□ -0.04
MDC1-209ENST00000613547 ALPK3Q96L96 1907 aa14.78□□□□□ -0.04
MDC1-209ENST00000613547 CEP290O15078 2479 aa14.77□□□□□ -0.04
MDC1-209ENST00000613547 CSF2RAP15509 400 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 EMC2Q15006 297 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 FAM26DQ5JW98 314 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 KIAA0319LQ8IZA0 1049 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 ZNF579Q8NAF0 562 aaKnown RBP14.77□□□□□ -0.05
MDC1-209ENST00000613547 SCLYQ96I15 445 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 SCLT1Q96NL6 688 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 CLIC6Q96NY7 704 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 CCSER1Q9C0I3 900 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 BHMT2Q9H2M3 363 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 DHX33Q9H6R0 707 aaKnown RBP14.77□□□□□ -0.05
MDC1-209ENST00000613547 ATP6V0A4Q9HBG4 840 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 RCOR1Q9UKL0 485 aa14.77□□□□□ -0.05
MDC1-209ENST00000613547 IGKV6-21A0A0C4DH24 114 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 USO1O60763 962 aaKnown RBP14.76□□□□□ -0.05
MDC1-209ENST00000613547 EYA4O95677 639 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 CLCN3P51790 818 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 GRB10Q13322 594 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 ECM1Q16610 540 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 PSRC1Q6PGN9 363 aaPredicted RBP14.76□□□□□ -0.05
MDC1-209ENST00000613547 PADI6Q6TGC4 694 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 LINC01465Q8N7H1 131 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 MCPH1Q8NEM0 835 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 LEO1Q8WVC0 666 aaPredicted RBP14.76□□□□□ -0.05
MDC1-209ENST00000613547 SYMPKQ92797 1274 aaKnown RBP14.76□□□□□ -0.05
MDC1-209ENST00000613547 EPSTI1Q96J88 318 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 CEP89Q96ST8 783 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 MTRQ99707 1265 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 GDF15Q99988 308 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 UBE2OQ9C0C9 1292 aaKnown RBP14.76□□□□□ -0.05
MDC1-209ENST00000613547 IL23AQ9NPF7 189 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 SUCLA2Q9P2R7 463 aaPredicted RBP14.76□□□□□ -0.05
MDC1-209ENST00000613547 TRPV2Q9Y5S1 764 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 CDY2AQ9Y6F7 541 aa14.76□□□□□ -0.05
MDC1-209ENST00000613547 MKI67P46013 3256 aaKnown RBP14.76□□□□□ -0.05
MDC1-209ENST00000613547 A0A087WWV3 80 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 E9PMD0 336 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 VTNP04004 478 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 SSBP05455 408 aaKnown RBP eCLIP14.75□□□□□ -0.05
MDC1-209ENST00000613547 TMEM62Q0P6H9 643 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 KARSQ15046 597 aaKnown RBP14.75□□□□□ -0.05
MDC1-209ENST00000613547 TMEM119Q4V9L6 283 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 SPECC1Q5M775 1068 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 DEFB128Q7Z7B8 93 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 USP38Q8NB14 1042 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 PSPC1Q8WXF1 523 aaKnown RBP14.75□□□□□ -0.05
MDC1-209ENST00000613547 PNMA5Q96PV4 448 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 PLIN2Q99541 437 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 CELF4Q9BZC1 486 aaKnown RBP14.75□□□□□ -0.05
MDC1-209ENST00000613547 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
MDC1-209ENST00000613547 FAM13BQ9NYF5 915 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 GINS2Q9Y248 185 aa14.75□□□□□ -0.05
MDC1-209ENST00000613547 ASAP2O43150 1006 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 ACTN1P12814 892 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 PLCG1P19174 1290 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 MGAT3Q09327 533 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 MXD4Q14582 209 aaPredicted RBP14.74□□□□□ -0.05
MDC1-209ENST00000613547 CSPP1Q1MSJ5 1256 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 KIZQ2M2Z5 673 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 ODR4Q5SWX8 454 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 RRAGBQ5VZM2 374 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 TRAF7Q6Q0C0 670 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 CHRDL2Q6WN34 429 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 CCDC73Q6ZRK6 1079 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 RHPN2Q8IUC4 686 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 NLRP7Q8WX94 980 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 TMEM143Q96AN5 459 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 MTIF3Q9H2K0 278 aaKnown RBP14.74□□□□□ -0.05
MDC1-209ENST00000613547 STK17AQ9UEE5 414 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 PCDHA7Q9UN72 937 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 SQORQ9Y6N5 450 aa14.74□□□□□ -0.05
MDC1-209ENST00000613547 MYH9P35579 1960 aaKnown RBP14.73□□□□□ -0.05
MDC1-209ENST00000613547 FGBP02675 491 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 CHRNA1P02708 482 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 CXCL10P02778 98 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 GHRP10912 638 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 CYP11B2P19099 503 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 BMP8BP34820 402 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 STAT6P42226 847 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 CRYBB1P53674 252 aaPredicted RBP14.73□□□□□ -0.05
MDC1-209ENST00000613547 NLRP11P59045 1033 aaKnown RBP14.73□□□□□ -0.05
MDC1-209ENST00000613547 TFDP1Q14186 410 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 TSHZ1Q6ZSZ6 1077 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 USP49Q70CQ1 688 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 KCNK18Q7Z418 384 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 ZNF410Q86VK4 478 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 PRPF31Q8WWY3 499 aaKnown RBP14.73□□□□□ -0.05
MDC1-209ENST00000613547 SEPT8Q92599 483 aa14.73□□□□□ -0.05
MDC1-209ENST00000613547 PYM1Q9BRP8 204 aaKnown RBP14.73□□□□□ -0.05
MDC1-209ENST00000613547 XPNPEP1Q9NQW7 623 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms