RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 USP17L6PQ6QN14 398 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 GSPT2Q8IYD1 628 aaKnown RBP16.54■□□□□ 0.24
TNXB-209ENST00000613214 RNF25Q96BH1 459 aaPredicted RBP16.54■□□□□ 0.24
TNXB-209ENST00000613214 CCDC124Q96CT7 223 aaKnown RBP16.54■□□□□ 0.24
TNXB-209ENST00000613214 PIM2Q9P1W9 311 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 L3MBTL1Q9Y468 752 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 POTEMA6NI47 508 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 ECE2O60344 883 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 HUS1O60921 280 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 CTNND1O60716 968 aaKnown RBP16.54■□□□□ 0.24
TNXB-209ENST00000613214 PYGLP06737 847 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 SPATA33Q96N06 139 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 ZSWIM6Q9HCJ5 1215 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 PCDHA6Q9UN73 950 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 PCDHA8Q9Y5H6 950 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 ZNF667Q5HYK9 610 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 SUSD4Q5VX71 490 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 RMDN1Q96DB5 314 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 H0Y3Z8 333 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 DDIASQ8IXT1 998 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 SLC44A5Q8NCS7 719 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 SENP1Q9P0U3 644 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 PNMA3Q9UL41 463 aa16.54■□□□□ 0.24
TNXB-209ENST00000613214 C2CD2LO14523 706 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 ZNF211Q13398 564 aaPredicted RBP16.53■□□□□ 0.24
TNXB-209ENST00000613214 ZNF658Q5TYW1 1059 aaPredicted RBP16.53■□□□□ 0.24
TNXB-209ENST00000613214 HSPA6P17066 643 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 PAMP19021 973 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 EN1Q05925 392 aaPredicted RBP16.53■□□□□ 0.24
TNXB-209ENST00000613214 DYDC2Q96IM9 177 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 CCDC17Q96LX7 622 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 ELP3Q9H9T3 547 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 TBX22Q9Y458 520 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 PARD3Q8TEW0 1356 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 SYCE1LA8MT33 242 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 ANKRD65E5RJM6 399 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 DR1Q01658 176 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 APOA5Q6Q788 366 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 ZBTB18Q99592 522 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 GYS2P54840 703 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 MCTP2Q6DN12 878 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 GALNT17Q6IS24 598 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 RINLQ6ZS11 566 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 MAGEB10Q96LZ2 347 aaPredicted RBP16.53■□□□□ 0.24
TNXB-209ENST00000613214 PIH1D3Q9NQM4 214 aaKnown RBP16.53■□□□□ 0.24
TNXB-209ENST00000613214 STRIP2Q9ULQ0 834 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 ATXN3P54252 364 aaPredicted RBP16.53■□□□□ 0.24
TNXB-209ENST00000613214 USP33Q8TEY7 942 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 TRIM49BA6NDI0 452 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 ATP9BO43861 1147 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 ADD2P35612 726 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 ARL4DP49703 201 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 TMPRSS15P98073 1019 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 RGS9BPQ6ZS82 235 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 SYTL2Q9HCH5 934 aa16.53■□□□□ 0.24
TNXB-209ENST00000613214 NLRP11P59045 1033 aaKnown RBP16.52■□□□□ 0.24
TNXB-209ENST00000613214 TDRD7Q8NHU6 1098 aaKnown RBP16.52■□□□□ 0.24
TNXB-209ENST00000613214 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.24
TNXB-209ENST00000613214 HIF1AQ16665 826 aa16.52■□□□□ 0.24
TNXB-209ENST00000613214 CC2D1AQ6P1N0 951 aaPredicted RBP16.52■□□□□ 0.24
TNXB-209ENST00000613214 EIF2AK4Q9P2K8 1649 aaKnown RBP16.52■□□□□ 0.24
TNXB-209ENST00000613214 ESRRAP11474 423 aaPredicted RBP16.52■□□□□ 0.24
TNXB-209ENST00000613214 STXBP2Q15833 593 aa16.52■□□□□ 0.24
TNXB-209ENST00000613214 ALG13Q9NP73 1137 aaKnown RBP16.52■□□□□ 0.24
TNXB-209ENST00000613214 STK17AQ9UEE5 414 aa16.52■□□□□ 0.24
TNXB-209ENST00000613214 ATP10BO94823 1461 aa16.52■□□□□ 0.23
TNXB-209ENST00000613214 PPP3CCP48454 512 aa16.52■□□□□ 0.23
TNXB-209ENST00000613214 LRRC74AQ0VAA2 488 aa16.52■□□□□ 0.23
TNXB-209ENST00000613214 TAF1BQ53T94 588 aaPredicted RBP16.52■□□□□ 0.23
TNXB-209ENST00000613214 FAM47EQ6ZV65 393 aa16.52■□□□□ 0.23
TNXB-209ENST00000613214 KCNV2Q8TDN2 545 aa16.52■□□□□ 0.23
TNXB-209ENST00000613214 DNAJC7Q99615 494 aa16.52■□□□□ 0.23
TNXB-209ENST00000613214 UGGT2Q9NYU1 1516 aa16.52■□□□□ 0.23
TNXB-209ENST00000613214 TAC1P20366 129 aa16.52■□□□□ 0.23
TNXB-209ENST00000613214 TRIM11Q96F44 468 aa16.52■□□□□ 0.23
TNXB-209ENST00000613214 EIF3CLB5ME19 914 aaKnown RBP16.51■□□□□ 0.23
TNXB-209ENST00000613214 MAN2A1Q16706 1144 aa16.51■□□□□ 0.23
TNXB-209ENST00000613214 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
TNXB-209ENST00000613214 IL31Q6EBC2 164 aa16.51■□□□□ 0.23
TNXB-209ENST00000613214 OR6P1Q8NGX9 317 aa16.51■□□□□ 0.23
TNXB-209ENST00000613214 EIF3CQ99613 913 aaKnown RBP16.51■□□□□ 0.23
TNXB-209ENST00000613214 RSPH10B2B2RC85 870 aa16.51■□□□□ 0.23
TNXB-209ENST00000613214 PGRMC1O00264 195 aaKnown RBP16.51■□□□□ 0.23
TNXB-209ENST00000613214 RSPH10BP0C881 870 aa16.51■□□□□ 0.23
TNXB-209ENST00000613214 CSE1LP55060 971 aaKnown RBP16.51■□□□□ 0.23
TNXB-209ENST00000613214 SPP2Q13103 211 aa16.51■□□□□ 0.23
TNXB-209ENST00000613214 MFSD4BQ5TF39 518 aa16.51■□□□□ 0.23
TNXB-209ENST00000613214 TMEM106CQ9BVX2 250 aa16.51■□□□□ 0.23
TNXB-209ENST00000613214 WARS2Q9UGM6 360 aaKnown RBP16.51■□□□□ 0.23
TNXB-209ENST00000613214 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms