RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PARNO95453 639 aaKnown RBP9.85□□□□□ -0.83
SMAD4-217ENST00000611848 CYP2C18P33260 490 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 TECP42680 631 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 FXR2P51116 673 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMAD4-217ENST00000611848 IGBP1P78318 339 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 FPGSQ05932 587 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 PPIGQ13427 754 aaKnown RBP eCLIP9.85□□□□□ -0.838e-6■■■■□ 22.7
SMAD4-217ENST00000611848 PDIA5Q14554 519 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 IQCB1Q15051 598 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 UGCGQ16739 394 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 MARCH8Q5T0T0 291 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 RPAINQ86UA6 219 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 C4orf19Q8IY42 314 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 BANK1Q8NDB2 785 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 ERMNQ8TAM6 284 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 DHX38Q92620 1227 aaKnown RBP9.85□□□□□ -0.83
SMAD4-217ENST00000611848 TIGD1Q96MW7 591 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 EIF2AK1Q9BQI3 630 aaKnown RBP9.85□□□□□ -0.83
SMAD4-217ENST00000611848 DNAJC25Q9H1X3 360 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 ZSWIM4Q9H7M6 989 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 HPSEQ9Y251 543 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 PCDHA2Q9Y5H9 948 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.85□□□□□ -0.834e-6■□□□□ 8.8
SMAD4-217ENST00000611848 TET1Q8NFU7 2136 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 POTEMA6NI47 508 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 MAGEB2O15479 319 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 OFD1O75665 1012 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 SLITRK3O94933 977 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 TPM3P06753 285 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 IQCF3P0C7M6 154 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 CKBP12277 381 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 RFC2P35250 354 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 ATP2C1P98194 919 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-217ENST00000611848 TRIM71Q2Q1W2 868 aaKnown RBP9.84□□□□□ -0.83
SMAD4-217ENST00000611848 ARL6IP4Q66PJ3 421 aaKnown RBP9.84□□□□□ -0.83
SMAD4-217ENST00000611848 DTHD1Q6ZMT9 781 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 TRMT1LQ7Z2T5 733 aaKnown RBP9.84□□□□□ -0.83
SMAD4-217ENST00000611848 RSPH3Q86UC2 560 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 RPUSD2Q8IZ73 545 aaKnown RBP9.84□□□□□ -0.83
SMAD4-217ENST00000611848 HSD17B14Q9BPX1 270 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 LXNQ9BS40 222 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 NIFKQ9BYG3 293 aaKnown RBP9.84□□□□□ -0.83
SMAD4-217ENST00000611848 WNT8AQ9H1J5 351 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 RYDENQ9NUL5 291 aaKnown RBP9.84□□□□□ -0.83
SMAD4-217ENST00000611848 ANO10Q9NW15 660 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 RGL1Q9NZL6 768 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 MORC2Q9Y6X9 1032 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-217ENST00000611848 TANC1Q9C0D5 1861 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 UMODL1Q5DID0 1318 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 MYH15Q9Y2K3 1946 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 SCN5AQ14524 2016 aa9.84□□□□□ -0.83
SMAD4-217ENST00000611848 SMIM35A0A1B0GVV1 85 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 ZBTB42B2RXF5 422 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 CUTAO60888 179 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 ZNF202O95125 648 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 STBD1O95210 358 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 LYPLA2O95372 231 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 CSF2RAP15509 400 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 SELPP16109 830 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 PFKFB1P16118 471 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 MUTP22033 750 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 KLRC1P26715 233 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 THPOP40225 353 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 CCL23P55773 120 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 RESP18Q5W5W9 173 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 HAUS3Q68CZ6 603 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 SARM1Q6SZW1 724 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 MTHFD1LQ6UB35 978 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 C11orf57Q6ZUT1 292 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-217ENST00000611848 OTUD6AQ7L8S5 288 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 TPH2Q8IWU9 490 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 NME8Q8N427 588 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 IGSF22Q8N9C0 903 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 TRAPPC12Q8WVT3 735 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 WNT8BQ93098 351 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 DYDC2Q96IM9 177 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 POLR3CQ9BUI4 534 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-217ENST00000611848 UBE2OQ9C0C9 1292 aaKnown RBP9.83□□□□□ -0.84
SMAD4-217ENST00000611848 PRO3102Q9H379 93 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 TUFT1Q9NNX1 390 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 KIAA1468Q9P260 1216 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 SEPT9Q9UHD8 586 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-217ENST00000611848 PPME1Q9Y570 386 aa9.83□□□□□ -0.84
SMAD4-217ENST00000611848 A0A1W2PPC1 479 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 C22orf31O95567 290 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 PFKMP08237 780 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 RPA1P27694 616 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 TMOD1P28289 359 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 MARCKSP29966 332 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-217ENST00000611848 YWHABP31946 246 aaKnown RBP9.82□□□□□ -0.84
SMAD4-217ENST00000611848 ZNF75DP51815 510 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 CYP4A11Q02928 519 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 TBC1D8BQ0IIM8 1120 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 CTTNQ14247 550 aaKnown RBP9.82□□□□□ -0.84
SMAD4-217ENST00000611848 TARBP2Q15633 366 aaKnown RBP9.82□□□□□ -0.84
SMAD4-217ENST00000611848 ZNF618Q5T7W0 954 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 SHC4Q6S5L8 630 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 RUFY4Q6ZNE9 571 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 LRRC8DQ7L1W4 858 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms