RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 GRIN1Q05586 938 aa16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 IER5Q5VY09 327 aa16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 EFCAB12Q6NXP0 572 aa16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 RPUSD2Q8IZ73 545 aaKnown RBP16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 METTL13Q8N6R0 699 aa16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 KRI1Q8N9T8 703 aaKnown RBP16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 SLC7A3Q8WY07 619 aa16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 SCLYQ96I15 445 aa16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 NT5C3AQ9H0P0 336 aa16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 FAM49AQ9H0Q0 323 aaPredicted RBP16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 IL23AQ9NPF7 189 aa16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 CIZ1Q9ULV3 898 aaPredicted RBP16.73■□□□□ 0.27
CSNK2A1-209ENST00000609606 RANBP2P49792 3224 aaKnown RBP16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 CHRNA1P02708 482 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 CXCL10P02778 98 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 UBA7P41226 1012 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 DNM2P50570 870 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 MGAT3Q09327 533 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 GPNMBQ14956 572 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 ECM1Q16610 540 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 ZNF579Q8NAF0 562 aaKnown RBP16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 PIGOQ8TEQ8 1089 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 VWCEQ96DN2 955 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 CCDC43Q96MW1 224 aaKnown RBP16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 MAP7D2Q96T17 732 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 SH2D3AQ9BRG2 576 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 CCSER1Q9C0I3 900 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 CSRNP2Q9H175 543 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 DDX19AQ9NUU7 478 aaKnown RBP16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 PCDH10Q9P2E7 1040 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 KIAA1024Q9UPX6 916 aa16.72■□□□□ 0.27
CSNK2A1-209ENST00000609606 M0QZ92 97 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 DGAT1O75907 488 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 CTSHP09668 335 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 CLCN3P51790 818 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 POLGP54098 1239 aaPredicted RBP16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 CDC42EP1Q00587 391 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 MBTPS1Q14703 1052 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 FOXD4L6Q3SYB3 417 aaPredicted RBP16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 TMEM119Q4V9L6 283 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 PSRC1Q6PGN9 363 aaPredicted RBP16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 FOXD4L3Q6VB84 417 aaPredicted RBP16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 CABP7Q86V35 215 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 LRRC71Q8N4P6 559 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 UBE2OQ9C0C9 1292 aaKnown RBP16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 SUGCTQ9HAC7 445 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 TSHZ2Q9NRE2 1034 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 RCOR1Q9UKL0 485 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 DNM3Q9UQ16 869 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 RBM19Q9Y4C8 960 aaKnown RBP16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 TRPV2Q9Y5S1 764 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 CDY2AQ9Y6F7 541 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 SQORQ9Y6N5 450 aa16.71■□□□□ 0.27
CSNK2A1-209ENST00000609606 A0A1W2PPC1 479 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 NBNO60934 754 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 EYA4O95677 639 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 EPHB4P54760 987 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 KRT85P78386 507 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 GRB10Q13322 594 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 EMC2Q15006 297 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 CHRDL2Q6WN34 429 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 C16orf59Q7L2K0 433 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 TCP11Q8WWU5 503 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 CALML4Q96GE6 196 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 CDK5RAP3Q96JB5 506 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 CLIC6Q96NY7 704 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 PNMA5Q96PV4 448 aa16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 CELF4Q9BZC1 486 aaKnown RBP16.7■□□□□ 0.26
CSNK2A1-209ENST00000609606 A0A087WWV3 80 aa16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 ARHGEF35A5YM69 484 aa16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 CUTAO60888 179 aa16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 VTNP04004 478 aa16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 TMEM240Q5SV17 173 aa16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 FAM43BQ6ZT52 329 aaPredicted RBP16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 MTRQ99707 1265 aa16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 ATP6V0A4Q9HBG4 840 aa16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 XPNPEP1Q9NQW7 623 aa16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 SUCLA2Q9P2R7 463 aaPredicted RBP16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 AKT3Q9Y243 479 aa16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 TRIOBPQ9H2D6 2365 aa16.69■□□□□ 0.26
CSNK2A1-209ENST00000609606 GPR32O75388 356 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 ACRP10323 421 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 TXLNAP40222 546 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 CRYBB1P53674 252 aaPredicted RBP16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 TMEM62Q0P6H9 643 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 DRP2Q13474 957 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 PLEKHG4Q58EX7 1191 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 FBXO47Q5MNV8 452 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 PADI6Q6TGC4 694 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 KCNK18Q7Z418 384 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 DEFB128Q7Z7B8 93 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 MCPH1Q8NEM0 835 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 PSPC1Q8WXF1 523 aaKnown RBP16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 SYMPKQ92797 1274 aaKnown RBP16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 EPSTI1Q96J88 318 aa16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.68■□□□□ 0.261e-7■■□□□ 13.2
CSNK2A1-209ENST00000609606 SCAND2PQ9GZW5 306 aaPredicted RBP16.68■□□□□ 0.26
CSNK2A1-209ENST00000609606 BHMT2Q9H2M3 363 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms