RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 BRAPQ7Z569 592 aa12.98□□□□□ -0.33
LINC00539-204ENST00000608957 LINC01465Q8N7H1 131 aa12.98□□□□□ -0.33
LINC00539-204ENST00000608957 GDPD5Q8WTR4 605 aa12.98□□□□□ -0.33
LINC00539-204ENST00000608957 TMEM40Q8WWA1 233 aa12.98□□□□□ -0.33
LINC00539-204ENST00000608957 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
LINC00539-204ENST00000608957 CELF4Q9BZC1 486 aaKnown RBP12.98□□□□□ -0.33
LINC00539-204ENST00000608957 DDX25Q9UHL0 483 aaKnown RBP12.98□□□□□ -0.33
LINC00539-204ENST00000608957 SAMM50Q9Y512 469 aa12.98□□□□□ -0.33
LINC00539-204ENST00000608957 MTCH2Q9Y6C9 303 aa12.98□□□□□ -0.33
LINC00539-204ENST00000608957 SPTBN5Q9NRC6 3674 aaKnown RBP12.97□□□□□ -0.33
LINC00539-204ENST00000608957 CCDC194A0A1B0GVG4 234 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 EML1O00423 815 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 ENPP3O14638 875 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 UPP2O95045 317 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 OATP04181 439 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 POU3F3P20264 500 aaPredicted RBP12.97□□□□□ -0.33
LINC00539-204ENST00000608957 ERVK-21P61565 698 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 KRT85P78386 507 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 DNM1Q05193 864 aaKnown RBP12.97□□□□□ -0.33
LINC00539-204ENST00000608957 NEK8Q86SG6 692 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 CKAP2LQ8IYA6 745 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 HAS1Q92839 578 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 PPP1R16BQ96T49 567 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 C17orf80Q9BSJ5 609 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 TMX1Q9H3N1 280 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 RC3H2Q9HBD1 1191 aaKnown RBP12.97□□□□□ -0.33
LINC00539-204ENST00000608957 KCNMB3Q9NPA1 279 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 VAV3Q9UKW4 847 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 PLXNA4Q9HCM2 1894 aa12.97□□□□□ -0.33
LINC00539-204ENST00000608957 MGEA5O60502 916 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 GPR32O75388 356 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 VTNP04004 478 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 LINC00271P0C7V0 271 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 NCLP19338 710 aaKnown RBP12.96□□□□□ -0.33
LINC00539-204ENST00000608957 SFNP31947 248 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 KRT2P35908 639 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 CLCN3P51790 818 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 JAK3P52333 1124 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 GNL2Q13823 731 aaKnown RBP12.96□□□□□ -0.33
LINC00539-204ENST00000608957 TARBP2Q15633 366 aaKnown RBP12.96□□□□□ -0.33
LINC00539-204ENST00000608957 CSPP1Q1MSJ5 1256 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 TMEM266Q2M3C6 531 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 IER5Q5VY09 327 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 PPP4R3AQ6IN85 833 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 FAM173BQ6P4H8 233 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 MIER3Q7Z3K6 550 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 DIS3L2Q8IYB7 885 aaKnown RBP12.96□□□□□ -0.33
LINC00539-204ENST00000608957 CRIPAKQ8N1N5 446 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 NME8Q8N427 588 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 TGS1Q96RS0 853 aaKnown RBP12.96□□□□□ -0.33
LINC00539-204ENST00000608957 SUGCTQ9HAC7 445 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 ERVK-5Q9HDB9 667 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 TCEAL9Q9UHQ7 104 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 MTUS1Q9ULD2 1270 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 PADI3Q9ULW8 664 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 NOC2LQ9Y3T9 749 aaKnown RBP12.96□□□□□ -0.33
LINC00539-204ENST00000608957 INSL6Q9Y581 213 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 SQORQ9Y6N5 450 aa12.96□□□□□ -0.33
LINC00539-204ENST00000608957 TCHHQ07283 1943 aa12.96□□□□□ -0.34
LINC00539-204ENST00000608957 BTBD18B2RXH4 712 aa12.95□□□□□ -0.34
LINC00539-204ENST00000608957 CCNT1O60563 726 aaKnown RBP12.95□□□□□ -0.34
LINC00539-204ENST00000608957 RPLP2P05387 115 aaKnown RBP12.95□□□□□ -0.34
LINC00539-204ENST00000608957 KIZQ2M2Z5 673 aa12.95□□□□□ -0.34
LINC00539-204ENST00000608957 MICALL1Q8N3F8 863 aa12.95□□□□□ -0.34
LINC00539-204ENST00000608957 LRRC71Q8N4P6 559 aa12.95□□□□□ -0.34
LINC00539-204ENST00000608957 BANK1Q8NDB2 785 aa12.95□□□□□ -0.34
LINC00539-204ENST00000608957 RDM1Q8NG50 284 aa12.95□□□□□ -0.34
LINC00539-204ENST00000608957 FAM167AQ96KS9 214 aa12.95□□□□□ -0.34
LINC00539-204ENST00000608957 SH2D3AQ9BRG2 576 aa12.95□□□□□ -0.34
LINC00539-204ENST00000608957 FOXP1Q9H334 677 aaPredicted RBP12.95□□□□□ -0.34
LINC00539-204ENST00000608957 WRAP73Q9P2S5 460 aaPredicted RBP12.95□□□□□ -0.34
LINC00539-204ENST00000608957 M0QZ92 97 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 DLL1O00548 723 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 GCFC2P16383 781 aaKnown RBP12.94□□□□□ -0.34
LINC00539-204ENST00000608957 U2AF2P26368 475 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC00539-204ENST00000608957 SPIRE1Q08AE8 756 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 PPP2R5CQ13362 524 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 DRP2Q13474 957 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 ATL3Q6DD88 541 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 EFCAB12Q6NXP0 572 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 FAM228AQ86W67 206 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 NOSTRINQ8IVI9 506 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 METTL13Q8N6R0 699 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 ZNF689Q96CS4 500 aaPredicted RBP12.94□□□□□ -0.34
LINC00539-204ENST00000608957 ZNF668Q96K58 619 aaPredicted RBP12.94□□□□□ -0.34
LINC00539-204ENST00000608957 ZNF396Q96N95 335 aaPredicted RBP12.94□□□□□ -0.34
LINC00539-204ENST00000608957 YME1L1Q96TA2 773 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 OSMRQ99650 979 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 COL25A1Q9BXS0 654 aaPredicted RBP12.94□□□□□ -0.34
LINC00539-204ENST00000608957 TSPYL2Q9H2G4 693 aaPredicted RBP12.94□□□□□ -0.34
LINC00539-204ENST00000608957 ADAMTS10Q9H324 1103 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 LMBRD1Q9NUN5 540 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 GINS2Q9Y248 185 aa12.94□□□□□ -0.34
LINC00539-204ENST00000608957 PAK2Q13177 524 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms